Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq6044 161 1e-34 seq8295 158 1e-33 seq14285 150 2e-31 seq13424 132 5e-26 seq5453 131 2e-25 seq633 122 1e-22 seq8407 111 2e-19 seq8951 102 9e-17 >seq6044 Length=6192 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || || || ||||| ||||| |||||||| ||| | Sbjct 4275 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTCG 4334 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| ||||||| || || |||||||||||||| || || || || ||| Sbjct 4335 GATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGATCAG 4394 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||||| || ||||| | || || ||| Sbjct 4395 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCCGATTACAAT 4454 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || |||||||| || | || || |||||||| Sbjct 4455 ATCCAGAAGGAGTCGACCCTTCATCTGGTGCTTCGCCTGCGCGGTGG 4501 >seq8295 Length=14778 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || || ||||||||||| || ||||||||||| ||| | Sbjct 5143 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACTCTTGAGGTCGAGCCTTCG 5084 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| ||||||| || || ||||||||||||||||| ||||| || ||| Sbjct 5083 GACACGATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCGGATCAG 5024 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || || || || || |||| || || || | ||||| || Sbjct 5023 CAGCGTCTGATCTTCGCCGGCAAACAGCTGGAAGATGGCCGCACTCTGTCGGACTACAAC 4964 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| ||||| || || | || || || ||||| Sbjct 4963 ATCCAGAAGGAATCCACCCTTCACCTGGTGCTCCGACTCCGTGGTGG 4917 >seq14285 Length=18903 Score = 150 bits (166), Expect = 2e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || ||||| ||||| || || || ||||| ||| || || | ||| | || ||||| Sbjct 1 CTGACCGGAAAGACCATCACGCTGGAGGTGGAGCCATCGGACACCATCGAGAACGTGAAG 60 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 ||||| |||||||| ||||| || || |||||||| ||||||||||| || || || || Sbjct 61 GCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAGCAGCGTCTGATCTTCGCCGGA 120 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| || || |||| |||||||| ||||||| ||| |||| ||||| |||||||| Sbjct 121 AAGCAGCTGGAAGATGGCCGTACCCTGTCAGACTACAATATCCAGAAGGAGTCCACTCTC 180 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || || | ||||| || || || Sbjct 181 CACCTGGTGCTCCGTCTGCGAGGAGG 206 >seq13424 Length=49246 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 || ||||| || || |||||||| || ||||| ||||| ||| | |||| || | Sbjct 1 GTGAAGACTCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCGGATACGATCGAG 60 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||||| || || ||||||||||||||||| || ||||| ||||||||||| || Sbjct 61 AACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAGCGTCTGATC 120 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| || ||||| | || || || | ||||| || |||| ||||| Sbjct 121 TTCGCCGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAACATCCAGAAGGAG 180 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || || | || | ||| | || |||||||||||| Sbjct 181 TCGACCTTGCACTTGGTCCTCCGGCTTCGCGGTGGA 216 >seq5453 Length=57727 Score = 131 bits (144), Expect = 2e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461 || |||||| ||||| || ||||| || || |||||||| || ||||| ||||| ||| | Sbjct 57533 TAGAATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCC 57592 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 |||| || | || | ||||| || || ||||||||||||||||| || ||||| Sbjct 57593 GTCGGATACGATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGA 57652 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 ||||||||||| || || || || ||||| || ||||| | || || || | ||||| Sbjct 57653 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTA 57712 Query 27582 TAATGTCCAAAAGGA 27596 || |||| ||||| Sbjct 57713 CAACATCCAGAAGGA 57727 >seq633 Length=15238 Score = 122 bits (134), Expect = 1e-22 Identities = 121/157 (77%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || ||||| ||||| || || || ||||| ||| || Sbjct 158 ATGCAGATTTTCGTCAAGACTCTGACCGGAAAGACCATCACGCTGGAGGTGGAGCCATCG 99 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || |||||||||| |||||||| ||||| || || |||||||| ||| Sbjct 98 GACACCATCGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCAGATCAG 39 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562 |||||||| || || || || ||||| || || |||| Sbjct 38 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGATG 2 >seq8407 Length=16212 Score = 111 bits (122), Expect = 2e-19 Identities = 279/422 (66%), Gaps = 4/422 (1%) Strand=Plus/Minus Query 31983 GGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTC 32042 |||||| | ||||| ||||| |||||| | | | ||| ||||| ||| Sbjct 7568 GGACGGGTTGAAGCCGGGCCAGCGGAAGGTGCTGTTTACGTGCTTCAAGCGTAACGACAA 7509 Query 32043 GAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCA 32102 | | || |||||||||| ||| || |||| | ||||| || | ||||| || || Sbjct 7508 GCGCGAGGTGAAGGTGGCCCAGTTGGCGGGTTCGGTGGCGGAAATGTCCGCCTACCATCA 7449 Query 32103 CGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAA 32162 ||||||| ||||||| || || ||||||| || ||||||| ||||| || Sbjct 7448 CGGCGAGCAGTCGCTCTGCTCGACGATCATCAACCTGGCGCAGAACTACGTCGGCAGCAA 7389 Query 32163 TAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA 32222 ||| | ||| | || | || || |||||||| || ||| | | || ||||| || Sbjct 7388 CAACATCAACCTGCTGTATCCGGGCGGTCAGTTTGGTACGCGGTTGACGGGCGGCAAAGA 7329 Query 32223 TGCTGCGAGCTCCCGTTACATCTTCAC--CCGTCTCGCACCTTCGACGCGCAAGATTTTC 32280 | || ||| | | ||||||||||| | ||| ||| |||||| |||||| Sbjct 7328 TAGCGCCAGCCCGAGGTACATCTTCACGATGATGTCGGCCCT--GACGCGGTGCATTTTC 7271 Query 32281 GACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCG 32340 ||||| ||||||| || |||| ||||| | || || ||| ||||| |||| ||| Sbjct 7270 CACCCGCTGGACGATCCGCTGCTGGAGTACCAGTTCGAGGACAACCAGCGAATCGAACCG 7211 Query 32341 GTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACG 32400 | | || ||| | | |||||| | || | |||||||| || || ||||| || Sbjct 7210 ATTTGGTATCTGCCGATCGTGCCGATGCTGCTGATCAACGGTGCGGACGGTATCGGTACC 7151 Query 32401 GG 32402 || Sbjct 7150 GG 7149 Score = 107 bits (118), Expect = 2e-18 Identities = 184/267 (69%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 31177 GGGTCCAAAAAGTCTCGAATTACGGGAATTCCGAAGCTCGACGACGCCAACTGGGCCGGT 31236 || || || ||||| |||| ||| || |||||||| || || || ||| |||||| Sbjct 8443 GGTTCGAAGAAGTCGAAGATTAAGGGCATCCCGAAGCTGGAGGATGCGAACGATGCCGGT 8384 Query 31237 ACCCACAAGTCGCACGAGTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTT 31296 | | ||| |||| | |||||||| || | |||||||| |||||||| || || | Sbjct 8383 TCGCGCAATTCGCTGAACTGCACGCTCATCCTGACCGAGGGAGACTCGGCCAAAACGTTG 8324 Query 31297 GCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGC 31356 || | | || || | || || || ||| || ||| ||| ||||||||||| || || Sbjct 8323 GCCGTGTCGGGGCTGGGAGTGGTCGGTCGCGATACGTACGGTGTGTTTCCGCTGCGCGGT 8264 Query 31357 AAGCCGCGTAACGTTCGTGACGCCTCCGTTAAACAGGTTACGGATAATGAAGAGTTTTCC 31416 |||| || ||||| || || || | || ||| || ||| || | || | | Sbjct 8263 AAGCTGCTGAACGTGCGCGAAGCGACTCACAAGCAGATTCTGGAGAACGCGGAAATCAAC 8204 Query 31417 AACCTGAAAAAGATCCTCGGGCTTCAG 31443 ||||||| |||||||||||| | ||| Sbjct 8203 AACCTGATCAAGATCCTCGGGTTGCAG 8177 >seq8951 Length=23152 Score = 102 bits (112), Expect = 9e-17 Identities = 79/94 (84%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 64772 CTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGA 64831 ||||||||||||| || ||||| ||||| |||||||| ||| |||| ||||||||||||| Sbjct 2541 CTATTTTCTGGCTGAAGAAGCGCGGCCTAATGCCAGGGCTGACGTTCTCGAACGAGCTGA 2482 Query 64832 TCTCTCGGGACGAGGGGCTCCACCAAGAATTTGC 64865 |||| || |||||||| || ||| || ||||| Sbjct 2481 TCTCGCGCGACGAGGGACTGCACTGTGACTTTGC 2448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570207694225840