Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq8295 89.7 3e-13 >seq8295 Length=14778 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || || | ||||| || || ||| ||||| || ||||| || || || || || || Sbjct 4926 AGTCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGG 4985 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || ||||| ||||| || || | |||||| || ||||| || | ||||||| Sbjct 4986 CCATCTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATTCCCTCC 5045 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 ||||| |||||| || | | || ||||| ||| || || | || Sbjct 5046 TTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGAGTG 5105 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || ||||| | |||||||| |||||||||||| Sbjct 5106 ATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATG 5144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314674338104831