Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq8951 143 2e-29 >seq8951 Length=23152 Score = 143 bits (158), Expect = 2e-29 Identities = 468/717 (65%), Gaps = 20/717 (3%) Strand=Plus/Plus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 ||||| || || || || || || || ||||| ||| ||||||||||| || || | Sbjct 2271 AGCAACCGATCCGCCACGAACTCAATGTACTGCGACATCAGTTCGCAGTTCATGCCGAGC 2330 Query 4434 AATCTC-ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | | || || || || || | |||| || || ||||| || || || || || Sbjct 2331 A-TGTCGACTGGCAGTGCCTTGGTCAGGAATTCCTGTTCGATCACGACCGCATCGCGAAT 2389 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 || || ||| || || || || || | || | || | |||| | || || Sbjct 2390 GATCTCCGTTACGCGCTCCTTCGACGGCTTCTGCACCAGATACCGGAACATCAGGCAGGC 2449 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGG 4611 ||| ||||| |||| || ||||| | || | ||||| ||||| || ||||| | || | Sbjct 2450 AAAGTCACAGTGCAGTCCCTCGTCGC-GCGAGATCAGCTCGTTCGAGAACGTCAGCCCTG 2508 Query 4612 GCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGC 4671 |||||| || | ||| || ||||| || ||||| ||||| ||| ||||| |||| Sbjct 2509 GCATTAGGCCGCGCTTCTTCAGCCAGAAAATAGCCGCAAAGCTGCCACTGAAGAAGATGC 2568 Query 4672 CTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT--CTTTA-A 4728 | || || || || ||||| || | || ||| || | |||| || | || | | Sbjct 2569 CCTCAACAGCAGCGAACGCAACCACACGTTCCCCAAA---GTTGGCCTTCTTGCTGGAGA 2625 Query 4729 TCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAA 4788 |||| || | ||||||| || || ||||| |||||||| | || | || ||||| | Sbjct 2626 TCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGATCGCGTTGA 2685 Query 4789 ATAATTTACT-----TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 | | | ||| | ||| ||||| | || || ||||| || || || || Sbjct 2686 ACAGAT-ACTCCCGCTCCTTC----GGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTA 2740 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 |||||| ||| | || || || ||||||||||| ||||| ||||| | || || || Sbjct 2741 CATTTCGCTATGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGT 2800 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 || || || || | | || | || || | || |||||||| |||||||| ||| Sbjct 2801 CACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGAGGC 2860 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCA 5023 || || || || | || || || || |||| | ||| | ||| || || ||| Sbjct 2861 GGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGACTTGAGCGATTCCCA 2920 Query 5024 GTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 | || || || | || || || ||||| || ||||| || || |||||||| Sbjct 2921 ATCTTTCATGTCCTTCGATAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCTTCCGC 2977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426974616362531