Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq6044 140 2e-28 seq14285 132 3e-26 seq8295 129 4e-25 seq633 127 1e-24 seq5453 123 2e-23 seq13424 107 1e-18 >seq6044 Length=6192 Score = 140 bits (154), Expect = 2e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||| ||||| || |||||| ||||| |||||||||| || ||| | || || Sbjct 4484 CACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGACAGGGTGCGGCCATCCTC 4425 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| ||||| ||||| | |||||||||||| | || | ||| ||||| ||| Sbjct 4424 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTG 4365 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| | | || || || | || || ||||| | ||||| ||||| Sbjct 4364 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTT 4305 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| || |||||||| ||||| Sbjct 4304 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 4275 >seq14285 Length=18903 Score = 132 bits (146), Expect = 3e-26 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || |||| ||| | | ||||||||| || ||| |||||| ||||| ||||| || | Sbjct 206 CCTCCTCGCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGAC 147 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || | || ||||||||||| ||||| ||||||| |||||||||||||| ||| Sbjct 146 AGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGAGGG 87 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | |||||||| ||| ||||| |||| | |||| | |||||||| | | ||||| Sbjct 86 ATGCCTTCCTTATCCTGAATCTTAGCCTTC-ACGTTCTCGATGGTGTCCGATGGCTCCAC 28 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAG 44316 ||||| ||| || |||||||| || || Sbjct 27 CTCCAGCGTGATGGTCTTTCCGGTCAG 1 >seq8295 Length=14778 Score = 129 bits (142), Expect = 4e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||| | |||||||||||| ||| ||||| ||||||||||| || | || ||| Sbjct 4926 AGTCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGG 4985 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || |||||||| || ||||| ||||||| |||||||||||| | ||| | || ||| Sbjct 4986 CCATCTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATTCCCTCC 5045 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||||| || | || ||||| | | || ||||| | || Sbjct 5046 TTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGAGTG 5105 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||| || ||||| || |||||||| || |||||| Sbjct 5106 ATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATG 5144 >seq633 Length=15238 Score = 127 bits (140), Expect = 1e-24 Identities = 124/157 (79%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || ||||||||||| ||||| ||||||| |||||||||||||| ||| | |||||||| Sbjct 4 TCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATGCCTTCCTTA 63 Query 44243 TCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301 ||| ||||| |||| | |||| | |||||||| | | |||||||||| ||| || Sbjct 64 TCCTGAATCTTAGCCTTC-ACGTTCTCGATGGTGTCCGATGGCTCCACCTCCAGCGTGAT 122 Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||| || || ||||| ||||| || |||||| Sbjct 123 GGTCTTTCCGGTCAGAGTCTTGACGAAAATCTGCATG 159 >seq5453 Length=57727 Score = 123 bits (136), Expect = 2e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| ||||||||||| |||| || ||| |||| ||||||||||| ||||| ||| Sbjct 57727 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 57668 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||| |||||||||||||| || | || ||||| ||| ||||| || | | ||| Sbjct 57667 ATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTT-GGCCTTGACGTT 57609 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || || || | | || ||||||| || || ||||| || || || |||||||| Sbjct 57608 CTCGATCGTATCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCAC 57549 Query 44326 GAAGATTTGCAT 44337 |||||| ||||| Sbjct 57548 GAAGATCTGCAT 57537 >seq13424 Length=49246 Score = 107 bits (118), Expect = 1e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| |||| || ||| |||| ||||||||||| ||||| || Sbjct 180 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAA 121 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||| |||||||||||||| || | || ||||| ||| ||||| || | | || Sbjct 120 GATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTT-GGCCTTGACGT 62 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || || || | | || ||||||| || || ||||| || || || ||||||| Sbjct 61 TCTCGATCGTATCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCA 2 Query 44325 C 44325 | Sbjct 1 C 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359927190973119