Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq10804 91.5 2e-13 >seq10804 Length=10989 Score = 91.5 bits (100), Expect = 2e-13 Identities = 225/338 (67%), Gaps = 10/338 (3%) Strand=Plus/Plus Query 50474 AGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAA 50533 ||| ||||| || ||||| ||||||||||||||| | || ||||| || |||| || Sbjct 304 AGGTGATTTGGGGCCTGTGTACGGTTTTCAATGGCGGCACTTTGGTGCAAAATACAAAAC 363 Query 50534 TTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTAT-AACGACGT 50592 ||| | | |||| || |||||| | || || || | | | || || | | Sbjct 364 GTGCCATGACGATTATTCTGGGCAAGGCATAGACCAGCTTGCAGAGGTAATCGACAAGAT 423 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 | ||||| ||||| ||||||| || || | |||| |||||||||||| ||||||| Sbjct 424 TAAAAAC-AACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCTTCCGATATCC 482 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG----CCACAGACAAT 50708 | | | | | | || || |||||| || |||||||| || || || || Sbjct 483 CTAATATGGCTCTTCCACCTTGTCATTGCTTGGCTCAATTTTTTGTTGATAACGGAGAA- 541 Query 50709 GTTTTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAAC 50768 ||||| || ||| || ||| |||| || ||| |||| || || || || |||||| Sbjct 542 ---TTATCATGCCAAATGTACCAACGATCGGCCGATGTGGGCTTGGGTGTACCATTCAAC 598 Query 50769 GTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806 | || ||| |||| | || || ||||||| || Sbjct 599 ATCGCAAGCTACTCTTTGCTCACCCATATGATCGCGCA 636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666955068094920