Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq497 116 3e-21 >seq497 Length=402095 Score = 116 bits (128), Expect = 3e-21 Identities = 228/332 (69%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||| ||||| || ||||| || | | ||| ||||||||||||||||| || || || Sbjct 124263 AGTAACATGGGCGATCATATGGGTCAGCAAAGAGTAGCTAGCAATGTTAAACGGAACACC 124204 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 || || | |||||| |||| ||||||| || || || | || ||||| | ||| | Sbjct 124203 CAATCCTACATCAGCCGATCGCTGATACATCTGGCAAGACAACTCTCCATTGCCAACAAA 124144 Query 101872 AAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCA 101931 ||| || || ||||| ||||| || |||| || ||||| || ||| |||||| Sbjct 124143 AAACTGTGCCAAGCAGTGACACGGCGGTAAGGCCATGTTGGGAATATCGGAAGGATTCCA 124084 Query 101932 AGCACACATTAACATCCTTCTATCTGTAGGGTTTG-TTTTTATAGTATCAATCAACTGTT 101990 ||| | ||| | || | | ||| ||| || ||| ||||||| | | |||| | | Sbjct 124083 AGCGCTCATGATGATTCGACGATC-GTAAGGATTGTTTTTTATTTTGTGTATCACTTCTG 124025 Query 101991 TTAATTGGTCAACTCCTTCTCCTTTATAATCG-CGCCCAACACCTTTATATTCTGCTCCG 102049 || ||||| | ||| | |||| | |||||| || | ||| |||| ||| || Sbjct 124024 CCAACTGGTCGATTCCCTGTCCTGTGTAATCGTCGTGGCA-TGTTTTGTATTTTGCACCA 123966 Query 102050 AAATGCCTCCACTGAAATCCATACACAGGTCC 102081 || || | ||||||||| ||||| || || || Sbjct 123965 AAGTGACGCCACTGAAAGCCATAAACTGGACC 123934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361245071373392