Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq497 116 3e-21
>seq497
Length=402095
Score = 116 bits (128), Expect = 3e-21
Identities = 228/332 (69%), Gaps = 4/332 (1%)
Strand=Plus/Minus
Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811
||| ||||| || ||||| || | | ||| ||||||||||||||||| || || ||
Sbjct 124263 AGTAACATGGGCGATCATATGGGTCAGCAAAGAGTAGCTAGCAATGTTAAACGGAACACC 124204
Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871
|| || | |||||| |||| ||||||| || || || | || ||||| | ||| |
Sbjct 124203 CAATCCTACATCAGCCGATCGCTGATACATCTGGCAAGACAACTCTCCATTGCCAACAAA 124144
Query 101872 AAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCA 101931
||| || || ||||| ||||| || |||| || ||||| || ||| ||||||
Sbjct 124143 AAACTGTGCCAAGCAGTGACACGGCGGTAAGGCCATGTTGGGAATATCGGAAGGATTCCA 124084
Query 101932 AGCACACATTAACATCCTTCTATCTGTAGGGTTTG-TTTTTATAGTATCAATCAACTGTT 101990
||| | ||| | || | | ||| ||| || ||| ||||||| | | |||| | |
Sbjct 124083 AGCGCTCATGATGATTCGACGATC-GTAAGGATTGTTTTTTATTTTGTGTATCACTTCTG 124025
Query 101991 TTAATTGGTCAACTCCTTCTCCTTTATAATCG-CGCCCAACACCTTTATATTCTGCTCCG 102049
|| ||||| | ||| | |||| | |||||| || | ||| |||| ||| ||
Sbjct 124024 CCAACTGGTCGATTCCCTGTCCTGTGTAATCGTCGTGGCA-TGTTTTGTATTTTGCACCA 123966
Query 102050 AAATGCCTCCACTGAAATCCATACACAGGTCC 102081
|| || | ||||||||| ||||| || || ||
Sbjct 123965 AAGTGACGCCACTGAAAGCCATAAACTGGACC 123934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361245071373392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |