Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq497 111 1e-19 >seq497 Length=402095 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 97115 CAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCC 97174 |||| ||||||||||||||| || | | ||| ||||||||||||||||| || || | Sbjct 124264 CAGTAACATGGGCGATCATATGGGTCAGCAAAGAGTAGCTAGCAATGTTAAACGGAACAC 124205 Query 97175 CTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACAT 97234 | | ||| | |||||| |||| ||||| | ||| || || | || ||||| | ||| Sbjct 124204 CCAATCCTACATCAGCCGATCGCTGATACATCTGGCAAGACAACTCTCCATTGCCAACAA 124145 Query 97235 AAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCC 97294 ||||||| ||| ||||| || || || ||||| || |||| ||| | ||||| Sbjct 124144 AAAACTGTGCCAAGCAGTGACACGGCGGTAAGGCCATGTTGGGAATATCGGAAGGATTCC 124085 Query 97295 AAGCACACATCAACATTCTTCTATCG 97320 |||| | ||| | |||| | |||| Sbjct 124084 AAGCGCTCATGATGATTCGACGATCG 124059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346778116809440