Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq672 86.0 5e-12
seq949 84.2 2e-11
>seq672
Length=1102954
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|||||||||||||||||||| ||| ||| | || ||||| || || ||||||||
Sbjct 391613 TCCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCGGCGAAG 391672
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|| | ||||| || || || || | || ||||| ||| ||| ||| ||| ||
Sbjct 391673 ATGAGACGCTGCTGATCTGGGGGAATTCCTTCCTTATCCTGAATCTTTGCCTTCACATTT 391732
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | ||||| | ||| ||||| | || || |||||||| || || || |||||
Sbjct 391733 TCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACG 391792
Query 45326 AAGATTTGCATG 45337
|| || ||||||
Sbjct 391793 AAAATCTGCATG 391804
>seq949
Length=1771395
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
||||||||||| |||||||| ||| || | || |||| || || || || ||
Sbjct 446706 TCCTTCTGAATATTGTAGTCCGACAGCGTACGGCCATCTTCCAACTGCTTGCCAGCAAAG 446765
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|||| ||||| || || || || | |||||||| ||| ||| || |||||| |
Sbjct 446766 ATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGAATCTTGGCCTTAACATTC 446825
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | | | || ||| ||||||| ||| |||||||| || || |||||||| ||
Sbjct 446826 TCGATGGTATCGGATGGCTCAACCTCCAGGGTGATCGTCTTTCCAGTTAGAGTCTTGACG 446885
Query 45326 AAGATTTGCATGTT 45339
||||| ||||| ||
Sbjct 446886 AAGATCTGCATTTT 446899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395068497549232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |