Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq628 104 2e-17
seq625 93.3 3e-14
>seq628
Length=1452984
Score = 104 bits (114), Expect = 2e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
||| || | || ||||| ||||| ||||| || | || || ||||| |||||
Sbjct 708337 CGTGTCGTCGCGTTTGCTGCTGTCGAAGGTATCTTCTTCAGCGGTAGCTTTGCCGCCATT 708278
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
|||||||||||||| ||| || ||||| || | | || || |||||| |||||
Sbjct 708277 TTCTGGCTGAAGAAGCGTGGACTGATGCCGGGACTTACCTTCTCGAACGAGCTGATTTCG 708218
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920
||||| ||||| ||||||||||||||||| || || |||||| | | ||| | | |||
Sbjct 708217 CGTGATGAAGGACTACACTGTGACTTTGCCTGCCTGATGTTTAAGTATCTGGTACAGAAA 708158
Query 22921 CC 22922
||
Sbjct 708157 CC 708156
>seq625
Length=188083
Score = 93.3 bits (102), Expect = 3e-14
Identities = 115/155 (74%), Gaps = 2/155 (1%)
Strand=Plus/Minus
Query 33563 TACGCATACCAGAGATGGGCGACAAGTTTGCATCGTTC-ACGGCCCAGAAGGGCACGTGC 33621
||||||| ||| |||| || || |||||||| ||| | |||| | |||| || ||||||
Sbjct 99325 TACGCATTCCACAGATCGGTGATAAGTTTGCTTCGCGCCACGGAC-AGAAAGGTACGTGC 99267
Query 33622 GGCATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTA 33681
|| || |||| |||| || |||||||| ||| ||| ||| | |||||| |
Sbjct 99266 GGTATTCAGTACCGCCAGGAAGATATGCCGTTTACGTGCGAGGGCATTACGCCGGACATT 99207
Query 33682 GTCATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716
||||||||||||| || |||| ||||| |||||
Sbjct 99206 ATCATCAACCCGCACGCTATCCCGTCGCGTATGAC 99172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356227556496976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |