Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq628 100 3e-16
>seq628
Length=1452984
Score = 100 bits (110), Expect = 3e-16
Identities = 286/440 (65%), Gaps = 0/440 (0%)
Strand=Plus/Plus
Query 13674 ACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGAC 13733
|| || ||||| || | || || || || | ||| || | |||||||| || || |||
Sbjct 707988 ACCTTGTCACAGCCCAACTCCAACAGCAAACGATCGGCTACGAACTCAATGTACTGTGAC 708047
Query 13734 ATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTT 13793
|| | ||| || |||||||| | | | || || | | || || |||||||| |
Sbjct 708048 ATCAGATCGCAGTTCATACCGAGCATATCGACTGGCAGTGCTTTCGTCAAAAATTCCTGC 708107
Query 13794 TCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTT 13853
|| || | || || || || || || | ||| || ||||| | |
Sbjct 708108 TCGATTGCAACCGCATCACGGATGATGGCCGTCACGCGCTCCTTCGAAGGTTTCTGTACC 708167
Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913
|||| ||||| || | || ||||| ||||| || || || ||||| | ||| ||
Sbjct 708168 AGATACTTAAACATCAGGCAGGCAAAGTCACAGTGTAGTCCTTCATCACGCGAAATCAGC 708227
Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973
||||| || || || | ||| ||||||| ||| || || || | ||| || || || |||
Sbjct 708228 TCGTTCGAGAAGGTAAGTCCCGGCATCAGTCCACGCTTCTTCAGCCAGAAAATGGCGGCA 708287
Query 13974 AATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14033
|| ||| ||||| || || || || ||||||||||| | | || || |||||
Sbjct 708288 AAGCTACCGCTGAAGAAGATACCTTCGACAGCAGCAAACGCGACGACACGCTCGCCAAAG 708347
Query 14034 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14093
||| || ||| | || ||||| || ||||| || | || || || | | |
Sbjct 708348 TTTGCCTTCTTGCTTGAGATCCAGTTCAGTGCCCAATCGGCCTTCTTCTTCACGCACGGC 708407
Query 14094 ATTGTTTCAATAGCATTAAA 14113
| |||||||| ||||| ||
Sbjct 708408 AGCGTTTCAATTGCATTGAA 708427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479719652732800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |