Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq628 95.1 1e-14
>seq628
Length=1452984
Score = 95.1 bits (104), Expect = 1e-14
Identities = 177/260 (68%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701
|||| ||||| || | || ||||| ||||| || || || ||||| | ||| ||
Sbjct 708168 AGATACTTAAACATCAGGCAGGCAAAGTCACAGTGTAGTCCTTCATCACGCGAAATCAGC 708227
Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761
||||| || || || | ||| ||||||| ||| || || || | ||| || || || ||
Sbjct 708228 TCGTTCGAGAAGGTAAGTCCCGGCATCAGTCCACGCTTCTTCAGCCAGAAAATGGCGGCA 708287
Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAAC 13821
|| ||| ||||| || || || || ||||||||||| | | || || |||||
Sbjct 708288 AAGCTACCGCTGAAGAAGATACCTTCGACAGCAGCAAACGCGACGACACGCTCGCCAAAG 708347
Query 13822 GATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 13881
||| || ||| |||| ||||| || ||||| || | || || || | | |
Sbjct 708348 TTTGCCTTCTTGCTTGAGATCCAGTTCAGTGCCCAATCGGCCTTCTTCTTCACGCACGGC 708407
Query 13882 ATTGTTTCGATTGCATTGAA 13901
| ||||| |||||||||||
Sbjct 708408 AGCGTTTCAATTGCATTGAA 708427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478580472554880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |