Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq672 131 2e-25
seq575 82.4 7e-11
>seq672
Length=1102954
Score = 131 bits (144), Expect = 2e-25
Identities = 161/220 (73%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
||||| ||||| || | ||||||||||| || | ||| || || || |||| |
Sbjct 391588 TCGCAGCACCAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCC 391647
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||||||||| || ||| | ||||| | | ||||||||||| ||||| ||||| ||
Sbjct 391648 ATCCTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATTCCTTCCTT 391707
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | ||| |||||||| || ||| ||||| | | ||||| |||| |||||
Sbjct 391708 ATCCTGAATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGAT 391767
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011
||| || || || || |||||||| || ||||||||| ||
Sbjct 391768 GGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGATT 391807
>seq575
Length=281738
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||| || | || || ||||| || | |||||| || || ||| ||||||
Sbjct 24155 CACCAGATGAAGGGTCGACTCCTTCTGAATGTTATAGTCAGACAGTGTGCGTCCATCCTC 24096
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || ||| | ||||| || | |||||||| || || || || || || || |
Sbjct 24095 CAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCCGGCGGGATGCCCTCCTTATCCTG 24036
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || ||||| || ||| || || | | | ||||| |||| || || || ||
Sbjct 24035 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATAGTCTT 23976
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| || |||||||||||
Sbjct 23975 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 23946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448283399733120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |