Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq872 242 1e-58
seq497 118 3e-21
>seq872
Length=887634
Score = 242 bits (268), Expect = 1e-58
Identities = 707/1075 (66%), Gaps = 43/1075 (4%)
Strand=Plus/Minus
Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489
||||| || | || ||||| || |||||||||||||| ||||| ||||| || || ||
Sbjct 222726 ATCAAGGGCAAGATCGTTGAGCGACCGCAGCATATGTTGATGCGCGTTGCGATCGGCATT 222667
Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549
||| | || | ||||| || || || || || || || || | || ||
Sbjct 222666 CATGGTGAAGACATCGATGCAGCAATCGAGACTTACAATCTGCTTTCGGAGCGCTACTTT 222607
Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACT-CGTAA--TCCACAGATGTCTTCT 363606
|| || ||| | || || |||| ||| | || || || ||| ||| |||| ||
Sbjct 222606 ACCCATGCCTCACCGACCATGTT---TGCGGCGGCTACGCAACGTCCGCAGTTGTCGTCC 222550
Query 363607 TGCTTTCTT-CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| || | ||| |||||| ||| || ||||||| || || || ||| |
Sbjct 222549 TG-TTTCTTGCTCACCATGTCGGACGACAGCATTGAAGGTATCTACGATACGCTGAAGCA 222491
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTG 363724
||||| || ||||| || ||| ||||||||||| | | || | ||| | |||| |
Sbjct 222490 GTGTGCACTGATTTCAAAATCTGCTGGCGGAATTGGGCTGAACG-TGCACTGTATTCGCG 222432
Query 363725 CACAGAACAGT---TACAT-TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATG 363780
| ||| || ||||| ||| ||||| ||| || || ||| |||| || |||
Sbjct 222431 C---GAAAGGTACGTACATCTCG-GGCACGAATGGAATTTCAAACGGGTTGGTGCCAATG 222376
Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840
|| || |||| ||||||| || | ||||| || |||||||| |||||| ||
Sbjct 222375 CTGCGCGTGTACAACAATACGGCCCGATACGTGGATCAGGGTGGCAACAAGCGCCCGGGA 222316
Query 363841 GCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGG 363900
|| ||||| || || ||||| || || | ||| | || |||||||| || || |
Sbjct 222315 GCTTTTGCCATCTACCTCGAACCGTGGCACGGTGATGTGTTCGAGTTTCTGGATCTGAAG 222256
Query 363901 AAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCT 363960
|||||||| || |||||||| |||||||||| || |||| || || | ||| || |
Sbjct 222255 AAAAACACCGGCAAAGAGGAGGTGCGTGCACGCGACATGTTTTACGCCTTGTGGATTCCG 222196
Query 363961 GACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCT--TTTGCCCACACG 364018
|| | || ||| |||| |||||||| | | ||| || | ||| | ||||| ||||
Sbjct 222195 GATCTGTTCATGGAGCGGGTGGAGGC--GAACGAAATGTGGAGTCTAATGTGCCCTCACG 222138
Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078
| ||||| ||| | || ||| |||||||| | | | || || ||| ||
Sbjct 222137 ATTGTCCCGGTTTGTCTGATAGCTGGGGTGAAAAGTTCGAGGCACTGTAC------ACTG 222084
Query 364079 AATCGGAGGGAAAGGCTCGTAAGACAATTCCC---------GCACAGAAGCTATGGTTTG 364129
| ||| | ||| |||| |||| | |||||| | | ||||| |
Sbjct 222083 GCTACGAGAAAGAGGGTCGT---TTTATTCGCCAGGTGAAGGCACAGGATTTGTGGTTCG 222027
Query 364130 CCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCA 364189
| ||||| || |||||| | || || || ||| |||||| ||||||| ||| | ||||
Sbjct 222026 CGATCATTGAATCGCAGGTGGAAACGGGCGTACCGTATATGCTGTACAAGGATGCATGCA 221967
Query 364190 ACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGA 364249
||||||| |||||||||| || |||| || ||| || ||| | || || ||||
Sbjct 221966 ACCGCAAAAGCAACCAGCAGAACATTGGCACCATTAAGTGTTCTAACTTGTGCACTGAGA 221907
Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTC 364309
|| | || ||| | | || || | ||| || || || || || |||||||| ||
Sbjct 221906 TTGTGGAGTACTCGTCGAAGGATGAAATTGCGGTTTGCAATCTGGCCTCGATCGCACTGA 221847
Query 364310 CGGCGTTTGTAAAA---GATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATC 364366
||| |||||| ||| | || | || | | || | || || || |
Sbjct 221846 ACATGTTCGTAAAATCCGATAGGACGTACGATTTCGTAAAGCTGAAGGATGTCGCCAAGA 221787
Query 364367 ATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCG 364426
| || ||||||| |||| | ||||||| || || ||||| | || || ||
Sbjct 221786 TAGTAACACGCAATCTGAACAAAATCATCGACATAAACTACTATCCGGTGCCGGAGGCGA 221727
Query 364427 AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA 364481
||||||| || ||||| || | || || ||| | ||||| |||||| | || ||
Sbjct 221726 AGCGTTCCAACATGCGCCACAGGCCCATCGGTATCGGTGTGCAGGGCATGGCCGA 221672
Score = 102 bits (112), Expect = 2e-16
Identities = 287/439 (65%), Gaps = 4/439 (1%)
Strand=Plus/Minus
Query 364720 AAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAG 364779
||||| |||| ||| ||||| || | || || ||||| || ||||| || |||||
Sbjct 221433 AAGCACGGTATTCGTAACTCGCTACTGCTGGCACCGATGCCGACAGCTTCGACGGCACAA 221374
Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839
|| | || ||||| |||| |||||| |||| || || |||| || || ||
Sbjct 221373 ATATTGGGCAACAATGAGTCCTTCGAGCCGTACACGTCGAACGTTTACAACCGACGTGTG 221314
Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899
|| || || || || | ||| || || | | || | | ||||| | | ||
Sbjct 221313 CTATCGGGCGAGTTCCAGGTGGTGAACCATCATCTGCTGCAAGATCTAACAGCGATGGGT 221254
Query 364900 CTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT 364959
|||||| | |||||||||| | ||| | || || || || | || ||||||
Sbjct 221253 TTGTGGGATCTTGACATGAAGAACAACATCTTGTCCAACAACGGATCGATTCAAAACATT 221194
Query 364960 CCAGGATTTCCAGAAGA--TCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGC 365017
| | | ||| | || || | ||| | |||| || |||||||| || || ||
Sbjct 221193 GAATCAATACCAAAGGAAATCCGCGACCTGT--ACAAGACGGTATGGGAGATCTCGGTGA 221136
Query 365018 GAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTA 365077
||| ||| | |||||||||||||| || || |||||| |||| || || ||||
Sbjct 221135 AAACATCCATCAAAATGGCGGCCGATCGGGGAGCGTTTATCGATCAGTCACAATCATTTA 221076
Query 365078 ACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGA 365137
|| || | || | |||| | || | |||||| || || || |||||||||| |||||
Sbjct 221075 ACATACACGTGGCCGAGCCGAACTATGGCAAGCTGACGTCGATCCATTTCTACGCGTGGA 221016
Query 365138 AATCCGGTCTTAAGACAGG 365156
| || || ||||| ||
Sbjct 221015 AGATGGGACTAAAGACGGG 220997
>seq497
Length=402095
Score = 118 bits (130), Expect = 3e-21
Identities = 217/310 (70%), Gaps = 6/310 (2%)
Strand=Plus/Plus
Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547
|||||| | || |||||||| || ||||| ||||| |||||||||||| | ||||||||
Sbjct 123924 AGGTGACTTAGGTCCAGTTTATGGCTTTCAGTGGCGTCACTTTGGTGCAAAATACAAAAC 123983
Query 111548 CATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTA-CAGAATGTCATTGATCAA 111605
|||| ||||| || |||||||| || || || ||||| || || | ||
Sbjct 123984 -ATGCCACGACGATTACACAGGACAGGGAATCGACCAGTTGGCAGAA-GTGATACACAAA 124041
Query 111606 ATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTG 111665
|| || ||||| || |||||| || || ||||| || ||||| || | |
Sbjct 124042 ATAAAAAACAATCCTTACGATCGTCGAATCATCATGAGCGCTTGGAATCCTTCCGATATT 124101
Query 111666 GAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTTATGTACACGACGGGAT 111724
|| ||||| | || || ||||| || | || ||||||| ||| | | ||
Sbjct 124102 CCCAACATGGCCTTACCGCCGTGTCA-CTGCTTGGCACAGTTTTTTGTTGGCAATGGAGA 124160
Query 111725 GCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATAT 111784
| | || ||||| |||||||||||||| |||||| | || | |||||||||||||| ||
Sbjct 124161 GTTGTCTTGCCAGATGTATCAGCGATCGGCTGATGTAGGATTGGGTGTTCCGTTTAACAT 124220
Query 111785 TGCAAGTTAC 111794
||| || |||
Sbjct 124221 TGCTAGCTAC 124230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303330354688544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |