Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq572 87.8 2e-12 >seq572 Length=1431544 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 38458 TGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATTCGGGCACCGGAGACC 38517 ||||||| | |||| ||||| || ||| |||||||| | ||| | |||| | || | Sbjct 493249 TGAAGCAAAAGCCGAAACAGCTGAGCGATGCCGGCTTTTTCTACACCGGCAAGAGCGATC 493190 Query 38518 AGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGCCTGCGGACGATCCGT 38577 ||| ||||| ||| |||||||| ||||| ||||||||||||| | || || |||| Sbjct 493189 GGGTGAAATGCTTCAGCTGCGGCGGTGGCCTAAAGGACTGGGAGCAGGACGATGAACCGT 493130 Query 38578 GGGCGCAGCACGCGCGCTGGT 38598 ||| ||||| || ||||| Sbjct 493129 GGGAACAGCATGCAATCTGGT 493109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537593845704320