Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq572 82.4 6e-11 >seq572 Length=1431544 Score = 82.4 bits (90), Expect = 6e-11 Identities = 112/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 105459 GAGGATTGGCC-ACTTAGTTTAAAACAAAGGCCAGAGCAATTGGCCGAAGCCGGTTTTTA 105517 ||||||||||| || | ||| || |||| ||| | || || ||| ||||| |||| Sbjct 493268 GAGGATTGGCCGACATCGTTGAAG-CAAAAGCCGAAACAGCTGAGCGATGCCGGCTTTTT 493210 Query 105518 CTACACCGGCAAAGGTGATAAAGTCAAATGTTTTTATTGCGACGGCGGCCTTAAGGATTG 105577 |||||||||||| | ||| || ||||| || |||| ||| ||||| ||||| || Sbjct 493209 CTACACCGGCAAGAGCGATCGGGTGAAATGCTTCAGCTGCGGCGGTGGCCTAAAGGACTG 493150 Query 105578 GGCAAACGCCGACGAACCGTGGGAGGAACATGCA 105611 || | | ||| ||||||||||| | |||||| Sbjct 493149 GGAGCAGGACGATGAACCGTGGGAACAGCATGCA 493116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423032823126400