Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq572 82.4 6e-11
>seq572
Length=1431544
Score = 82.4 bits (90), Expect = 6e-11
Identities = 112/154 (73%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 105459 GAGGATTGGCC-ACTTAGTTTAAAACAAAGGCCAGAGCAATTGGCCGAAGCCGGTTTTTA 105517
||||||||||| || | ||| || |||| ||| | || || ||| ||||| ||||
Sbjct 493268 GAGGATTGGCCGACATCGTTGAAG-CAAAAGCCGAAACAGCTGAGCGATGCCGGCTTTTT 493210
Query 105518 CTACACCGGCAAAGGTGATAAAGTCAAATGTTTTTATTGCGACGGCGGCCTTAAGGATTG 105577
|||||||||||| | ||| || ||||| || |||| ||| ||||| ||||| ||
Sbjct 493209 CTACACCGGCAAGAGCGATCGGGTGAAATGCTTCAGCTGCGGCGGTGGCCTAAAGGACTG 493150
Query 105578 GGCAAACGCCGACGAACCGTGGGAGGAACATGCA 105611
|| | | ||| ||||||||||| | ||||||
Sbjct 493149 GGAGCAGGACGATGAACCGTGGGAACAGCATGCA 493116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423032823126400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |