Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq497 105 6e-18
>seq497
Length=402095
Score = 105 bits (116), Expect = 6e-18
Identities = 232/345 (67%), Gaps = 2/345 (1%)
Strand=Plus/Minus
Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296
|| ||||||||||| || | ||||| || | | || ||||| ||||||||||| |||
Sbjct 124268 AGTCCAGTAACATGGGCGATCATATGGGTCAGCAAAGAGTAGCTAGCAATGTTAAACGGA 124209
Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356
|| ||||| || | || |||| | |||||||| ||| || || | ||| || | |
Sbjct 124208 ACACCCAATCCTACATCAGCCGATCGCTGATACATCTGGCAAGACAACTCTCCATTGCCA 124149
Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416
||| |||| || || ||||||| ||||| | ||||| | | || | ||
Sbjct 124148 ACAAAAAACTGTGCCAAGCAGTGACACGGCGGTAAGGCCATGTTGGGAATATCGGAAGGA 124089
Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476
||||| || | ||| ||||||| | ||||| ||||| ||||||||| | | |
Sbjct 124088 TTCCAAGCGCTCATGATGATTCGACGATCGTAAGGATTGTTTTTTATTTTGTGTATCACT 124029
Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGT-CCACGTACGCCGC 20535
| | ||| ||||| | ||||| ||||| || || | | || | ||| ||
Sbjct 124028 TCTGCCAACTGGTCGATTCCCTGTCCTGTGTAATCGTCGT-GGCATGTTTTGTATTTTGC 123970
Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580
|||||||| | |||||| || || ||||| || || || || ||
Sbjct 123969 ACCAAAGTGACGCCACTGAAAGCCATAAACTGGACCTAAGTCACC 123925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441365120113280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |