Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq574 91.5 3e-13
>seq574
Length=269012
Score = 91.5 bits (100), Expect = 3e-13
Identities = 185/273 (68%), Gaps = 14/273 (5%)
Strand=Plus/Plus
Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 297496
||||| ||||| | | || ||| |||||| || ||| ||| | || ||| |||||
Sbjct 37960 GTGAAGATATACCTGGGGCTAGCGCTATCCTTTCCGCCCGTCAAGCGCGTACCAAACTGA 38019
Query 297497 CCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACG 297556
|| | || | | | |||||||||||||||||||| || | |||||| | || |||
Sbjct 38020 CCGCCAGGATAGAGCAGATTGATGTTATTGCTTCCGACGTAGTTCTGTGCCAAATTTACG 38079
Query 297557 ATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCG 297616
|| ||| || ||| || ||||| || || ||| | ||| || || ||||
Sbjct 38080 ATCGTCGAGCAAAGCGATTGCTCACCATGATGGTAAGCGGATTTCTCCGCGACCGAACCT 38139
Query 297617 CTGAACTGTGCAACCTTCACGTC-----GGTCGTCAAATTGCGCTTGAA--AGCTGAATA 297669
||||| || |||||||| || ||||||| |||||||| || ||| |
Sbjct 38140 GCCAACTGCGCCACCTTCACCTCACGCTTGTCGTCA-----CGCTTGAAGCAGGTGA--A 38192
Query 297670 TATCACTTTCCGTTGAGAAGGTTTGAAACCATC 297702
|| ||| ||||||||| ||||| ||||| ||
Sbjct 38193 TAGCACCTTCCGTTGACCCGGTTTCAAACCGTC 38225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102860330135200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |