Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq872 127 2e-24
>seq872
Length=887634
Score = 127 bits (140), Expect = 2e-24
Identities = 667/1044 (64%), Gaps = 33/1044 (3%)
Strand=Plus/Plus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|| ||||||||||| |||||||| || ||| |||||| || || | ||| ||||| | |
Sbjct 220982 CGCAGGTAGTACATGCCCGTCTTTAGTCCCATCTTCCACGCGTAGAAATGGATCGACGTC 221041
Query 113657 AACTTGGAGAGTGTTGGACTTT-CCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715
| |||| | ||| | || ||| | | ||| | ||| || |||||||| ||
Sbjct 221042 AGCTTGCC-ATAGTTCGGCTCGGCCACGTGTATGTTAAATGATTGTGACTGATCGATAAA 221100
Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCT 113775
||| ||||| |||||||| | || |||| | ||| ||||| || || |
Sbjct 221101 CGCTCCCCGATCGGCCGCCATTTTGATGGATGTTTTCACCGAGATCTCCCATACCGTCTT 221160
Query 113776 GTAGAGGTTCTTAATATCATCTGGGAT--ATCCACGATATTTTGGATGGAGCCACCCGCC 113833
||| |||| || || | ||| || || || || ||||| || || ||
Sbjct 221161 GTACAGGTCGCGGATTTCCTTTGGTATTGATTCA--ATGTTTTGAATCGATCCGTTGT-- 221216
Query 113834 TTGACCA--TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCA 113891
| ||| | || | |||||| || ||| | ||| ||| | | ||||| | ||
Sbjct 221217 TGGACAAGATGTTGTTCTTCATGTCAAGATCCCACAAACCCATCGCTGTTAGATCTTGCA 221276
Query 113892 CGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGG 113951
||||| | || || || ||||| |||| || |||| || | || |
Sbjct 221277 GCAGATGATGGTTCACCACCTGGAACTCGCCCGATAGCACACGTCGGTTGTAAACGTTCG 221336
Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCA 114011
|||||| ||||| ||| |||||||||| ||||| ||||| || || || ||||| ||||
Sbjct 221337 ACGTGTACGGCTCGAAGGACTCATTGTTGCCCAATATTTGTGCCGTCGAAGCTGTCGGCA 221396
Query 114012 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTTCCTTGAGGGC 114069
| ||||||| || || |||||| | ||| | ||| | ||| ||||| | |
Sbjct 221397 TCGGTGCCAGCAGTAGCGAGTTACGAATACCGTGCTTTGC--AATCTTCTCCTTCAACTC 221454
Query 114070 GTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCT 114127
||||| | || | | | | || | |||||| || |||| |||| |||
Sbjct 221455 TGTCCAGTTCCACAGATCCG--TCGGTTCTTTGTTCCACATTTCGTACTGTAGGACACCC 221512
Query 114128 TGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAG 114187
| | |||| | || ||| | ||||||||||| || || | ||||||||| ||
Sbjct 221513 TTGCTCACTGGACAACCTTCATACGTCTCGTATGGACCGTCCCGTGCAGCCAATTCGCAG 221572
Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTT--GG 114245
|| || || || ||| | | || || || ||||| || | ||||| || || ||
Sbjct 221573 CTTGCTTCCAGTGCTCCATAGTAGATGGTTTCAAATATTTGTTGATTCA--GCTTTTGGG 221630
Query 114246 CCTCGTCGGAATCAAACGCGAGTCGGCAC-AAAATAAATACATCCGCGAGACCTTGGACA 114304
|||| ||| || | | || ||| ||||| || |||| || | || || |||
Sbjct 221631 CCTCTTCGCTTTCGTATG-GATAGCGCATTAAAATGAACGCATCGGCCATGCCCTGCACA 221689
Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACT--TTCGAGCGGTCTCCACGGGATAAA 114362
|||| || || || | || | ||| || || |||| | | ||| |||||
Sbjct 221690 CCGATACCGATGGGCCTGTGGCGCATGTTGGAACGCTTCG--CCTCCGGCACCGGATAGT 221747
Query 114363 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 114422
| || | ||||| | | || ||||| || || | ||| | || || | ||||
Sbjct 221748 AGTTTATGTCGATGATTTTGTTCAGATTGCGTGTTACTATCTTGGCGACATCCTTCAGCT 221807
Query 114423 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 114482
|| || |||| | | | | || || || || | || ||||| || ||||
Sbjct 221808 TTACGAAATCGTACGTCCTA---TCGGATTTTACGAACATGTTCAGTGCGATCGAGGCCA 221864
Query 114483 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 114542
|||| || || | | |||||||| | |||||| | ||| || || ||||| || |
Sbjct 221865 GATTGCAAACCGCAATTTCATCCTTCGACGAGTACTCCACAATCTCAGTGCACAAGTTAG 221924
Query 114543 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG-TGTTACACGCATCCTTGTAA 114601
||| |||||||||||| | ||||| || ||| |||| ||| || |||||||||||
Sbjct 221925 AACACTTAATGGTGCCAATGTTCTGCTG-GTTGCTTTTGCGGTTGCATGCATCCTTGTAC 221983
Query 114602 AGCATGTATGGCGTCCCCGTCTCC 114625
||||| || || ||||| |||
Sbjct 221984 AGCATATACGGTACGCCCGTTTCC 222007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597343206047360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |