Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq872 183 5e-41
>seq872
Length=887634
Score = 183 bits (202), Expect = 5e-41
Identities = 343/499 (69%), Gaps = 4/499 (1%)
Strand=Plus/Plus
Query 203833 CTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA 203892
|||||| ||||||||||| || || ||||| || ||||| || || | | ||| |||||
Sbjct 220933 CTTCGTTTTGTCCACCGTAAATTGGATGGCATTTACGGCCGGTTTGGTGCGCAGGTAGTA 220992
Query 203893 CATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC 203952
|||||| |||||||| ||| ||| |||| |||| | || || || | ||| ||||
Sbjct 220993 CATGCCCGTCTTTAGTCCCATCTTCCACGCGTAGAAATGGATCGACGTCAGCTTGCCATA 221052
Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012
||| || ||||||| ||| ||||| | || || || ||||| || | |||||||
Sbjct 221053 GTTCGGCTCGGCCACGTGTATGTTAAATGATTGTGACTGATCGATAAACGCTCCCCGATC 221112
Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCT 204072
|| ||||| ||||| || ||| ||| |||||||| ||||||||| ||| ||| |
Sbjct 221113 GGCCGCCATTTTGATGGATGTTTTCACCGAGATCTCCCATACCGTCTTGTACAGGTCGCG 221172
Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA 204131
| | | | || | | | | | || || ||||| ||||||| || || | |
Sbjct 221173 GATTTCCTTTGGTA-TTGATTCAATGTTTTGAATCGATCCGTTGTTGGACAAGATGTTGT 221231
Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAAC-CTGATCAGCTCCCGCACCAGGTGGGGGTTG 204190
|| || | || |||||| |||| | ||| | || || ||| ||| || ||||
Sbjct 221232 TCTTCATGTCAAGATCCCACAAACCCATCGCTG-TTAGATCTTGCAGCAGATGATGGTTC 221290
Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250
| | ||| || || || || ||||| | |||| || | | ||| ||| | || |||
Sbjct 221291 ACCACCTGGAACTCGCCCGATAGCACACGTCGGTTGTAAACGTTCGACGTGTACGGCTCG 221350
Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310
|| | ||| |||||||| || || || || || || || ||||| || ||||| ||
Sbjct 221351 AAGGACTCATTGTTGCCCAATATTTGTGCCGTCGAAGCTGTCGGCATCGGTGCCAGCAGT 221410
Query 204311 AGGGAGTTGCGCACACCGT 204329
|| ||||| || | |||||
Sbjct 221411 AGCGAGTTACGAATACCGT 221429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795141364299520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |