Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq628 176 5e-39 seq672 127 2e-24 >seq628 Length=1452984 Score = 176 bits (194), Expect = 5e-39 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 133161 ACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGAT 133220 ||| | ||| |||||||| || || ||||| || ||| || || ||||| || || Sbjct 708526 ACGAATGTACGTGTCGATTAGCAGTGAGTACATCTCGCTGTGCACATTTTCCATCGCTAT 708585 Query 133221 TTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGAC 133280 ||||||||||||||| || || || || ||||| || || || |||||| ||||| Sbjct 708586 TTGAAAGCCGTAAAAACAGCGAGCTTCCGTTACCTGTACCTCCTGGCTGAAACGTTCGAC 708645 Query 133281 CAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAA 133340 ||| |||||||| |||||||| ||| ||||| || ||||| || |||||| ||| || Sbjct 708646 CAGGTTTTCGTTCACGATGCCATCGGATGCGGCAAAGAAGGCAAGTACGTGCGAGATAAA 708705 Query 133341 ATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTC 133400 ||||| ||| | ||||| |||||||| | ||||||||||||| |||||||| Sbjct 708706 GTGGCGTTCGCTCGGTTTCAACGAATCCCAGTCTTTCATGTCCTTGGACAGATCCACCTC 708765 Query 133401 CTCGACGGTCCAAAACGACGCCTCGGC 133427 || |||||||| ||||| || || || Sbjct 708766 TTCCACGGTCCAGAACGAAGCTTCCGC 708792 >seq672 Length=1102954 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| ||||| |||||||| | || |||||| | | Sbjct 391803 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 391744 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | ||| || | || || || ||||||||| | || || Sbjct 391743 GACACGATCGAAAATGTGAAGGCAAAGATTCAGGATAAGGAAGGAATTCCCCCAGATCAG 391684 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| || || |||||||| || | ||||| || ||||||||| Sbjct 391683 CAGCGTCTCATCTTCGCCGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 391624 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || || |||||| | || || ||| |||||||||| Sbjct 391623 ATTCAGAAGGAATCTACCCTTCATCTGGTGCTGCG 391589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500164096993280