Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq628 176 5e-39
seq672 127 2e-24
>seq628
Length=1452984
Score = 176 bits (194), Expect = 5e-39
Identities = 199/267 (75%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 133161 ACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGAT 133220
||| | ||| |||||||| || || ||||| || ||| || || ||||| || ||
Sbjct 708526 ACGAATGTACGTGTCGATTAGCAGTGAGTACATCTCGCTGTGCACATTTTCCATCGCTAT 708585
Query 133221 TTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGAC 133280
||||||||||||||| || || || || ||||| || || || |||||| |||||
Sbjct 708586 TTGAAAGCCGTAAAAACAGCGAGCTTCCGTTACCTGTACCTCCTGGCTGAAACGTTCGAC 708645
Query 133281 CAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAA 133340
||| |||||||| |||||||| ||| ||||| || ||||| || |||||| ||| ||
Sbjct 708646 CAGGTTTTCGTTCACGATGCCATCGGATGCGGCAAAGAAGGCAAGTACGTGCGAGATAAA 708705
Query 133341 ATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTC 133400
||||| ||| | ||||| |||||||| | ||||||||||||| ||||||||
Sbjct 708706 GTGGCGTTCGCTCGGTTTCAACGAATCCCAGTCTTTCATGTCCTTGGACAGATCCACCTC 708765
Query 133401 CTCGACGGTCCAAAACGACGCCTCGGC 133427
|| |||||||| ||||| || || ||
Sbjct 708766 TTCCACGGTCCAGAACGAAGCTTCCGC 708792
>seq672
Length=1102954
Score = 127 bits (140), Expect = 2e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| ||||| ||||| |||||||| | || |||||| | |
Sbjct 391803 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 391744
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | ||| | || | ||| || | || || || ||||||||| | || ||
Sbjct 391743 GACACGATCGAAAATGTGAAGGCAAAGATTCAGGATAAGGAAGGAATTCCCCCAGATCAG 391684
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | ||| || || |||||||| || | ||||| || |||||||||
Sbjct 391683 CAGCGTCTCATCTTCGCCGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 391624
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|| || |||||| | || || ||| ||||||||||
Sbjct 391623 ATTCAGAAGGAATCTACCCTTCATCTGGTGCTGCG 391589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500164096993280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |