Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq672 111 6e-19 >seq672 Length=1102954 Score = 111 bits (122), Expect = 6e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | |||||||| |||||||| || || || || || || ||||| || || | Sbjct 391806 ATCATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCCT 391747 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 || || | || ||| | | || ||| ||||| ||||||||||||||||| || ||| Sbjct 391746 TCGGACACGATCGAAAATGTGAAGGCAAAGATTCAGGATAAGGAAGGAATTCCCCCAGAT 391687 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 || || ||| | || ||| | || || || || || ||||| | ||| || |||| || Sbjct 391686 CAGCAGCGTCTCATCTTCGCCGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTAC 391627 Query 391227 AATATTGATAAGGATGCAACACTTCA 391252 || ||| | ||||| | || ||||| Sbjct 391626 AACATTCAGAAGGAATCTACCCTTCA 391601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975683163062336