Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq335 120 2e-21
seq506 100 2e-15
seq451 100 2e-15
>seq335
Length=1493947
Score = 120 bits (132), Expect = 2e-21
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTT 518562
|||||| | || || ||||| || || || ||||| || || || ||| | || | ||
Sbjct 63514 ACCAATCAGACGCTTGGCATCGAAGATCGTGTTGGTCGGGTTCATGGCAACCTGGTTCTT 63573
Query 518563 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCG 518622
||| ||||| ||||||||| | || || || || || | ||||| ||||| || || ||
Sbjct 63574 GGCAGCATCGCCAATCAGACGCTCCGTGTCAGTGAAGGCCACATACGATGGCGTGGTTCG 63633
Query 518623 ATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACT 518682
||||| || ||||| || || ||||| |||||||| | || | || || ||||| ||
Sbjct 63634 GTTACCCTGGTCATTGGCGATGATTTCTACTTTACCGTGCTGGAAAACTCCGACACAGCT 63693
Query 518683 AAAAGTTGTTCCTAAATCAATACCAA 518708
| || || || | |||||||||||
Sbjct 63694 GTAGGTCGTGCCCAGATCAATACCAA 63719
>seq506
Length=1292245
Score = 100 bits (110), Expect = 2e-15
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 870812 TCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACTATTATTGGT 870871
|| || || ||| | || |||||||||||| |||| |||||| | || || || ||||||
Sbjct 1076242 TCGTCGCCCAATGTGGCGAAAGAAATGCATGTTGGCCATTTACGTTCGACCATAATTGGT 1076301
Query 870872 GAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATTAATCATGTG 870931
|| || |||||| | | | ||| | ||| || ||||| | || || || || |
Sbjct 1076302 GATTCGATTTGTCGTTTCCTGGAATTTGTTGGCCATGATGTATTGCGCATAAACCACATC 1076361
Query 870932 GGTGATTGGGGAACTCAATTCGGTATGTTAATTGC 870966
||||| |||||||| || ||||| |||||||||||
Sbjct 1076362 GGTGACTGGGGAACGCAGTTCGGCATGTTAATTGC 1076396
>seq451
Length=710502
Score = 100 bits (110), Expect = 2e-15
Identities = 298/458 (65%), Gaps = 4/458 (1%)
Strand=Plus/Minus
Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910
|||| || || ||||||| ||||||| ||||| | | || ||||| | || ||||
Sbjct 407741 AATCGATACCCTCGAACAGGGAATCAATCTCAATGCTTGCCTGGGTCGATGCGGACAGTG 407682
Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCA 517970
||| || || || || || || || | | | || || || ||| ||| |
Sbjct 407681 TACGCTTTGCTCGCTCGCAAGCCGTACGCAACCGGCGCAACGCAC--GCTTGTTGCTCGT 407624
Query 517971 AATCTGTTTTATAT--TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 518028
||| | || | | || | ||| || ||||| ||| | | || | ||||| ||
Sbjct 407623 AATGTCCTTCTTGTGCTTGCGCTTAAACTCTTCGACAAAGTGGGACACCATGCGATTGTC 407564
Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088
||| || || || |||| | ||||| || | ||| | | |||| |||| |||||
Sbjct 407563 AAAGTCCTCCCCACCCAGGTGAGTATCGCCAGCCGTTGACTTAACTTCAAAAATGCCATC 407504
Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148
|||| | | | | |||||| || |||||||| | ||| || || ||||||||
Sbjct 407503 CTCAATGGTAAGGATCGATACATCGAACGTACCACCACCAAGATCGAAGATCAGTACATT 407444
Query 518149 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208
|| | || || || || || ||||||| || || || || ||||| ||
Sbjct 407443 ACGCTCGCCGGAACCCTTCTTGTCCAGCCCGTACGCAATGGCCGCTGCCGTCGGTTCGTT 407384
Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268
||| || | || ||||| | ||| || || || |||||||||||||| || | |||
Sbjct 407383 AATGATGCGCAGCACATTCAAACCGGCGATCGCACCAGCATCTTTAGTGGCCTGACGTTG 407324
Query 518269 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306
|||||||| || || || || || || || || ||||
Sbjct 407323 CGAATCGTTGAAGTACGCTGGGACCGTGATGACTGCAT 407286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780753324374752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |