Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_018874.1
Length=211518
Score E
Sequences producing significant alignments: (Bits) Value
seq336 131 2e-25
>seq336
Length=532411
Score = 131 bits (144), Expect = 2e-25
Identities = 190/264 (72%), Gaps = 6/264 (2%)
Strand=Plus/Plus
Query 197022 CAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTC 197081
|||||| || ||| ||| |||||||||||||| || || | | ||| | ||| ||
Sbjct 386725 CAGATCTTCATCGGAAAATCCCGTACCGATCTTGCAGATCGTCTGATACTCTTCGTTCTC 386784
Query 197082 GGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTC--CCACCCCG 197139
| | ||| |||||||| | |||| ||||||| ||||| || | ||||| | |||||
Sbjct 386785 GTCGTCGTAGCAGGCGAGCAGGAAACCGCCGTACGTTCCGGTACGCTTTCCGCGTCCCCG 386844
Query 197140 TTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTC 197199
| | || ||||| || |||| ||| || | |||| |||||| || || || |||
Sbjct 386845 AT--AACCACCGATTACAACCAAATCGAGCGAATCGCCCACCCCGGTCAGATAGTCCTTC 386902
Query 197200 TTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGT-CCAG 197258
||||| || | ||| | | |||| || || || ||||| |||||| | |||| ||||
Sbjct 386903 TTCAGCTTCAACCAATTGCGCGATCGTTTCGCGATTTCGTACGTTGCG-TCACGTGCCAG 386961
Query 197259 GGTCTTGATCATCAATCCCTCGCA 197282
||||| | ||||| |||||||||
Sbjct 386962 CGTCTTCACCATCAGTCCCTCGCA 386985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 676717824904960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |