Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq1360 170 3e-37
>seq1360
Length=640366
Score = 170 bits (188), Expect = 3e-37
Identities = 349/519 (67%), Gaps = 0/519 (0%)
Strand=Plus/Minus
Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847
|| || ||||| ||||| || || |||| || || || | ||| | |||||| || |||
Sbjct 380913 CCCGTCGCAATTACAAAGTCTTCCGGTTTGTCCTGCTGCATCATAAGCCACATCGCTTCG 380854
Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907
|| |||||| | || || ||||||||||| | || ||||| || || | | | |
Sbjct 380853 ACGTAATCTTTTGCGTGGCCCCAGTCACGTTTCGAGTCGAGATTACCCAGCTCCAGATAC 380794
Query 47908 TCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTT 47967
||||||| || || ||| | | | | ||||| || || ||||||||| ||
Sbjct 380793 TCTTGCTGGCCGAGCGAAATTTTTGCCACCGAGCGGGTAATTTTGCGCGTTACAAAATTT 380734
Query 47968 TCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTAT 48027
|| || || | || || || || ||||| ||||| || | ||||| |||| ||||
Sbjct 380733 TCTCCCCGGCGCGGTGACTCGTGGTTAAAGAGAATCCCGTTGCAGGCGAACATGTCGTAC 380674
Query 48028 GATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAA 48087
| ||| |||||||| | || |||||||| || || | || ||| | | || || ||
Sbjct 380673 GCTTCGCGATAGTTTATCACAATCCAGTATCCGTACATCTTCGCACAAGCGTACGGTGAG 380614
Query 48088 CGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCA 48147
||||||||||| || || | || ||||||| ||||| |||||| || || || ||
Sbjct 380613 CGTGGATAGAACGGAGTCTTTTCGTTCTGTGGTGTCTCGGCCACCTTTCCGTACAGCTCC 380554
Query 48148 CTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGCCTCA 48207
||||| ||||| |||| || || | | |||| | | | ||||| || ||
Sbjct 380553 GACGTGGAAGCTTGGTAGAAGCGGACAGTCTTTTCCTGCCCGACGGTACGGATGGCATCT 380494
Query 48208 AGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAA 48267
|||| | || || || | |||||| || | ||||| ||| || || |||||
Sbjct 380493 AGCAAACGTAGTGTACCGACAGCATCTACCTCCGCCGTATATTCGCTCAAATCGAACGAT 380434
Query 48268 ACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTCA 48306
| ||| || || || || || | ||||| || || |||
Sbjct 380433 ATCTTGACGTGGCTTTGGGCGGCCAGATTGTAGATTTCA 380395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665482820397440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |