Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq575 93.3 3e-14
seq949 84.2 1e-11
>seq575
Length=281738
Score = 93.3 bits (102), Expect = 3e-14
Identities = 162/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | || || | ||||| ||| || || ||| || || ||||| || || |
Sbjct 24174 CACCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTATAGTCAG 24115
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| ||||||||| | || |||| || || ||||| || ||||||||||||||||| |||
Sbjct 24114 ACAGTGTGCGTCCATCCTCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCCGGCG 24055
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | || || || || || ||| ||| |||| || | || || | ||
Sbjct 24054 GGATGCCCTCCTTATCCTGGATCTTCGCCTTC-ACATTCTCGATCGTATCCGAGGGCTCG 23996
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
|| |||| || || || ||||| || | ||||| || ||||||||||| ||
Sbjct 23995 ACCTCAAGGGTAATAGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCGT 23943
>seq949
Length=1771395
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| | |||| ||| ||||| || || || || ||||| || ||
Sbjct 446670 CCACCACGTAGACGAAGGACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAGTCCGAC 446729
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || || | || ||||| || || || ||||| |||| ||||||||||||| | ||
Sbjct 446730 AGCGTACGGCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGATCTGGTGGG 446789
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || || || ||| || | | ||||| || | ||| ||| || || ||
Sbjct 446790 ATTCCCTCCTTATCCTGAATCTT-GGCCTTAACATTCTCGATGGTATCGGATGGCTCAAC 446848
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | |||||||| || || |||| || || || |||||||||||
Sbjct 446849 CTCCAGGGTGATCGTCTTTCCAGTTAGAGTCTTGACGAAGATCTGCAT 446896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328698423536640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |