Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq672 114 3e-20 >seq672 Length=1102954 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || || || ||||| | || || || ||| ||||| ||||| Sbjct 391788 AAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCGGACACGATCGAAAAT 391729 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||| || || ||||||||| || || || | || |||||| Sbjct 391728 GTGAAGGCAAAGATTCAGGATAAGGAAGGAATTCCCCCAGATCAGCAGCGTCTCATCTTC 391669 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| |||| ||||| | ||| || | || |||||| | ||||| || ||| Sbjct 391668 GCCGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAACATTCAGAAGGAATCT 391609 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||| || || || ||||||| Sbjct 391608 ACCCTTCATCTGGTGCTGCGACTTCG 391583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181799722226032