Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq872 141 8e-29
>seq872
Length=887634
Score = 141 bits (156), Expect = 8e-29
Identities = 501/776 (65%), Gaps = 19/776 (2%)
Strand=Plus/Plus
Query 136638 CACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTT 136697
||| || |||||||| | ||| |||| ||||| || | ||| |||||||||||||||||
Sbjct 220945 CACCGTAAATTGGATGGCATTTACGGCCGGTTTGGTGCGCAGGTAGTACATGCCCGTCTT 221004
Query 136698 TAAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGC 136757
|| ||| ||| ||| | || ||| || || | || | |||| |||| |||||
Sbjct 221005 TAGTCCCATCTTCCACGCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTCGGCTCGGC 221064
Query 136758 CACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT 136817
|||| | || | ||||| ||||||||| | | ||| || || || ||||| ||
Sbjct 221065 CACGTGTATGTTAAATGATTGTGACTGATCGATAAACGCTCCCCGATCGGCCGCCATTTT 221124
Query 136818 CAATAGTACTTTTTGCTTA-ATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876
| | | |||| | | || ||||| | || || | || || || | |
Sbjct 221125 GA-TGGATGTTTTCACCGAGATCTCCCATACCGTCTTGTACAGGTCGCGGATTTCCTTTG 221183
Query 136877 GAATTTCATCGATATTCTGTACAGATCCGTTGTTTTT---GATGATTTTCATCATG---A 136930
| ||| || || || || | ||||||||||| |||| | ||| ||||| |
Sbjct 221184 GTATTGATTCAATGTTTTGAATCGATCCGTTGTTGGACAAGATGTTGTTCTTCATGTCAA 221243
Query 136931 GATCAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTT 136990
|||| | | | || || | || | | | ||||| || || || || |
Sbjct 221244 GATCCCACAAACCCA------TCGCTGTTAGATCTTGCAGCAGATGATGGTTCACCACCT 221297
Query 136991 GATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATT 137050
| | |||||||||||||| | || ||| | || ||| |||||||||| || |
Sbjct 221298 GGAACTCGCCCGATAGCACACGTCGGTTGTAAACGTTCGACGTGTACGGCTCGAAGGACT 221357
Query 137051 CGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAAT 137110
| ||||| ||||| || ||||| |||| ||||||||||| || | || | || |
Sbjct 221358 CATTGTTGCCCAATATTTGTGCCGTCGAAGCTGTCGGCATCGGTGCCAGCAGTAGCGAGT 221417
Query 137111 TCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTTCG 137170
| || | |||||| || | | | ||| | |||| ||||||||||||||| |||
Sbjct 221418 TACGAATACCGTGCTTTGCAATCTTCTCCTTCAACTCTGTCCAGTTCCACAGATCCGTCG 221477
Query 137171 ATTGGGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCAT 137230
|| | | ||||||| || |||| | | || || | |||| || |||
Sbjct 221478 GTT---CTTTGTTCCACATTTCGTACTGTAGGACACCCTTGCTCACTGGACAACCTTCAT 221534
Query 137231 AAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATAGT 137290
| | || |||| |||| | || |||| ||| || | ||||| |||||||
Sbjct 221535 ACGTCTCGTATGGACCGTCCCGTGCAGCCAATTCGCAGCTTGCTTCCAGTGCTCCATAGT 221594
Query 137291 AAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGGGCATAT 137350
| || ||||| | |||| | ||||| | | || |||| ||| ||||| || |||
Sbjct 221595 AGATGGTTTCAAATATTTGTTGATTCAGCTTTTGGGCCTCTTCGCTTTCGTATGG-ATAG 221653
Query 137351 C-CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTG 137405
| || || | ||| ||||| || | || || | |||||||||||| || |||||
Sbjct 221654 CGCATTAAAATGAACGCATCGGCCATGCCCTGCACACCGATACCGATGGGCCTGTG 221709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445086655357440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |