Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq1360 129 9e-25 >seq1360 Length=640366 Score = 129 bits (142), Expect = 9e-25 Identities = 363/555 (65%), Gaps = 12/555 (2%) Strand=Plus/Plus Query 161173 TGAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAG--GAACCTGAA 161230 ||| |||||||| || | || || || || || || |||| ||||| || | ||| Sbjct 380395 TGAAATCTACAATCTGGCCGCCCAAAGCCACGTCAAGATATCGTTCGATTTGAGC--GAA 380452 Query 161231 TATACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTA 161290 ||||| || || |||||| | || || ||| | | | || || | ||| | | Sbjct 380453 TATACGGCGGAGGTAGATGCTGTCGGTACACTACGTTTGCTAGATGCCATCCGTACCGTC 380512 Query 161291 GGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTA 161350 || | | | | ||||| ||||||| || ||||| ||| |||| || ||| Sbjct 380513 GGGCAGGAAAAGACTGTCCGCTTCTACCAAGCTTCCACGTCGGAGCTGTACGGAAAGGTG 380572 Query 161351 CAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCT 161410 |||||||||||||| |||| || || ||||| ||||| || || || | || Sbjct 380573 GCCGAGACACCACAGAACGAAAAGACTCCGTTCTATCCACGCTCACCGTACGCTTGTGCG 380632 Query 161411 AAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGT 161470 || | || ||||| |||||||| | ||||| | || || | ||| |||| | Sbjct 380633 AAGATGTACGGATACTGGATTGTGATAAACTATCGCGAAGCGTACGACATGTTCGCCTGC 380692 Query 161471 AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAG 161530 | || ||||| || ||||| |||||||| || ||||| || | ||| ||||| || || Sbjct 380693 AACGGGATTCTCTTTAACCACGAGTCACCGCGCCGGGGAGAAAATTTTGTAACGCGCAAA 380752 Query 161531 ATTA----CTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGG 161586 |||| || || | | | ||| || | || || | ||| | || || Sbjct 380753 ATTACCCGCTCGGTGGCAA----AAATTTCGCTCGGCCAGCAAGAGTATCTGGAGCTGGG 380808 Query 161587 TAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTT 161646 |||||| |||| | ||| || ||||| || || |||| || || || || |||||| | Sbjct 380809 TAATCTCGACTCGAAACGTGACTGGGGCCACGCAAAAGATTACGTCGAAGCGATGTGGCT 380868 Query 161647 GATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATTCAGT 161706 ||| | || ||||| | || || |||| ||| ||||| || ||| || | | || || Sbjct 380869 TATGATGCAGCAGGACAAACCGGAAGACTTTGTAATTGCGACGGGTGAAACGCACTCGGT 380928 Query 161707 GAAGGACTTTGTAGA 161721 | || ||||| || Sbjct 380929 GCGTGAATTTGTCGA 380943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729916899224960