Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq1360 129 9e-25
>seq1360
Length=640366
Score = 129 bits (142), Expect = 9e-25
Identities = 363/555 (65%), Gaps = 12/555 (2%)
Strand=Plus/Plus
Query 161173 TGAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAG--GAACCTGAA 161230
||| |||||||| || | || || || || || || |||| ||||| || | |||
Sbjct 380395 TGAAATCTACAATCTGGCCGCCCAAAGCCACGTCAAGATATCGTTCGATTTGAGC--GAA 380452
Query 161231 TATACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTA 161290
||||| || || |||||| | || || ||| | | | || || | ||| | |
Sbjct 380453 TATACGGCGGAGGTAGATGCTGTCGGTACACTACGTTTGCTAGATGCCATCCGTACCGTC 380512
Query 161291 GGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTA 161350
|| | | | | ||||| ||||||| || ||||| ||| |||| || |||
Sbjct 380513 GGGCAGGAAAAGACTGTCCGCTTCTACCAAGCTTCCACGTCGGAGCTGTACGGAAAGGTG 380572
Query 161351 CAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCT 161410
|||||||||||||| |||| || || ||||| ||||| || || || | ||
Sbjct 380573 GCCGAGACACCACAGAACGAAAAGACTCCGTTCTATCCACGCTCACCGTACGCTTGTGCG 380632
Query 161411 AAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGT 161470
|| | || ||||| |||||||| | ||||| | || || | ||| |||| |
Sbjct 380633 AAGATGTACGGATACTGGATTGTGATAAACTATCGCGAAGCGTACGACATGTTCGCCTGC 380692
Query 161471 AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAG 161530
| || ||||| || ||||| |||||||| || ||||| || | ||| ||||| || ||
Sbjct 380693 AACGGGATTCTCTTTAACCACGAGTCACCGCGCCGGGGAGAAAATTTTGTAACGCGCAAA 380752
Query 161531 ATTA----CTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGG 161586
|||| || || | | | ||| || | || || | ||| | || ||
Sbjct 380753 ATTACCCGCTCGGTGGCAA----AAATTTCGCTCGGCCAGCAAGAGTATCTGGAGCTGGG 380808
Query 161587 TAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTT 161646
|||||| |||| | ||| || ||||| || || |||| || || || || |||||| |
Sbjct 380809 TAATCTCGACTCGAAACGTGACTGGGGCCACGCAAAAGATTACGTCGAAGCGATGTGGCT 380868
Query 161647 GATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATTCAGT 161706
||| | || ||||| | || || |||| ||| ||||| || ||| || | | || ||
Sbjct 380869 TATGATGCAGCAGGACAAACCGGAAGACTTTGTAATTGCGACGGGTGAAACGCACTCGGT 380928
Query 161707 GAAGGACTTTGTAGA 161721
| || ||||| ||
Sbjct 380929 GCGTGAATTTGTCGA 380943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729916899224960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |