Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq872 264 1e-65
seq575 98.7 8e-16
seq672 95.1 1e-14
>seq872
Length=887634
Score = 264 bits (292), Expect = 1e-65
Identities = 1059/1645 (64%), Gaps = 43/1645 (3%)
Strand=Plus/Plus
Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465
|| || || || ||||| |||||||| |||||| |||||||||| || ||||||||
Sbjct 220940 TTGTCCACCGTAAATTGGATGGCATTTACGGCCGGTTTGGTGCGCAGGTAGTACATGCCC 220999
Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGG--TAATTGG 130523
|| || ||||| || || | || ||||| || | ||| || || |
Sbjct 221000 GTCTTTAGTCCCATCTTCCACGCGTAGAAATGGATCGACGTCA--GCTTGCCATAGTTCG 221057
Query 130524 GTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAG 130583
| | |||||| |||||| | ||||| || ||||| ||||| || |||| || || |
Sbjct 221058 GCTCGGCCACGTGTATGTTAAATGATTGTGACTGATCGATAAACGCTCCCCGATCGGCCG 221117
Query 130584 CCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATG 130642
|||| | || | ||| ||| | |||||||| | |||||||| || || | ||
Sbjct 221118 CCATTTTGATGGATGTTTTCACCGAG-ATCTCCCATACCGTCTTGTACAGGTCGCGGATT 221176
Query 130643 TGTTTGGGTATGCGCGCAATCGATTGAA-CGCTACCGTTGTTGGCTATAATTTCGTTGCG 130701
| || ||||| |||| ||||| || | |||||||||| | || | |||
Sbjct 221177 TCCTTTGGTATTGATTCAATGTTTTGAATCGAT-CCGTTGTTGGACAAGATGTTGTTCTT 221235
Query 130702 CATACTTTTATCGTACAATCCAA--GCTGTACAAGATCTTTTACCAAATGATTATTAATG 130759
||| ||| |||| || | ||||| ||||||| | || ||||| || |
Sbjct 221236 CATGTCAAGATCCCACAAACCCATCGCTGTT--AGATCTTGCAGCAGATGATGGTTCACC 221293
Query 130760 ATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAG 130819
| || || || || | || || |||| ||||| ||| |||| |||| || |||
Sbjct 221294 ACCTGGAACTCGCCCGATAGCACACGTCGGTTGTAAACGTTCGACGTGTACGGCTCGAAG 221353
Query 130820 GATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGA 130879
|| || |||||||| ||||||||||| || | || || ||||| ||||| | |||
Sbjct 221354 GACTCATTGTTGCCCAATATTTGTGCCGTCGAAGCTGTCGGCATCGGTGCCAGCAGTAGC 221413
Query 130880 GAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAG 130939
|| ||||||| ||||||| | | || || |||||| || ||| | ||| |||
Sbjct 221414 GAGTTACGAATACCGTGCTTTGCAATCTTCTCCTTCAACTCTGTCCAGTTCCACAGATCC 221473
Query 130940 GTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGAT 130999
|| |||| | ||||||||||| || | ||||| | || || || | |||| |
Sbjct 221474 GTCGGTT---CTTTGTTCCACATTTCGTACTGTAGGACACCCTTGCTCACTGGACAACCT 221530
Query 131000 TCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCG 131059
|| ||| ||||| || || ||||| ||| ||| ||||||| |||||
Sbjct 221531 TCATACGTCTCGTATGGACCGTCCCGTGCAGCCAATTCGCAGCTTGCTTCCAGTGCTCCA 221590
Query 131060 TAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGA 131119
|| || |||||||| ||||||| ||| | | || || | | ||| ||||| |||
Sbjct 221591 TAGTAGATGGTTTCAAATATTTGTTGATTCAGCTTTTGGGCCTCTTCGCTTTCGTATGGA 221650
Query 131120 AATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATGT 131179
| ||||||||| || || || || | ||||| | || | || | || || ||
Sbjct 221651 TAGCGCATTAAAATGAACGCATCGGCCATGCCCTGCACACCGATACCGATGGGCCTGTGG 221710
Query 131180 TTTAAATTACATTTACGC-GAACATTCGG--TGGGATAAAGGTTAATGTCAATTATTTTG 131236
| || | |||| | | ||| ||||| ||| ||||| || ||||||
Sbjct 221711 CGCATGTTGGA---ACGCTTCGCCTCCGGCACCGGATAGTAGTTTATGTCGATGATTTTG 221767
Query 131237 TTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCA 131296
|| | |||||| ||| || | | ||| |||| || ||||||| |||| |
Sbjct 221768 TTCAGATTGCGTGTTACTATCTTGGCGACATCCTTCAGCTTTACGAAATCGTACGTCC-- 221825
Query 131297 GTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTCG 131356
| ||| ||||| || || | || || |||||||| ||||| || ||||
Sbjct 221826 -TATCGGATTTTACGAACATGTTCAGTGCGATCGAGGCCAGATTGCAAACCGCAATTTCA 221884
Query 131357 TCATAATCG--CAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCA 131414
|| | ||| | |||| ||||| || | |||||| ||| | ||| |||||||| |
Sbjct 221885 TCCT--TCGACGAGTACTCCACAATCTCAGTGCACAAGTTAGAACACTTAATGGTGCCAA 221942
Query 131415 AATTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCCC 131473
|| || || |||||||| || | |||| |||||||||| ||| || || ||||
Sbjct 221943 TGTTCTGCTGGTTGCTTTT-GCGGTTGCATGCATCCTTGTACAGCATATACGGTACGCCC 222001
Query 131474 GTTTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTGATATT 131531
||||| || || | |||||| | | |||| | | | | || || ||
Sbjct 222002 GTTTCCACCTGCGATTCAATGA--TCGCGAACCACAAATCCTGTGCCTTCACCTGGCGAA 222059
Query 131532 TGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAAC 131591
| | | || ||| ||||| ||||| | || || |||| || | | |
Sbjct 222060 TAAAACGACCCTCTTTCTCGTAGCCAGTGTACAGTGCCTCGAACTTTT---CACCCCAGC 222116
Query 131592 TGTC---CAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAA 131648
| || |||| |||||| ||| || |||||||| ||||| ||||| || |
Sbjct 222117 TATCAGACAAACCGGGACAATCGTGAGGGCACATTAGACTCCACATTTCGTTCGCCTCCA 222176
Query 131649 CTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCT 131708
| |||| ||| |||| |||||| | ||| || ||||| |||| || | || ||
Sbjct 222177 CCCGCTCCATGAACAGATCCGGAATCCACAAGGCGTAAAACATGTCGCGTGCACGCACCT 222236
Query 131709 CTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTT 131768
| ||| | || | |||| |||| || | ||| || || | || | ||||| ||||
Sbjct 222237 CCTCTTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCGAACACATCACCGTGCCACGGTT 222296
Query 131769 CCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCA 131825
| | || | || | || || |||| || || || |||| || | || ||
Sbjct 222297 CGAGGTAGATGGCAAAAGCTCCCGGGCGCTTGTTGCCACCCTGATCCACGTATCGGGCCG 222356
Query 131826 TGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAA 131885
| |||||||| ||||||| ||| ||| |||| ||||| | ||||||| |||| | |
Sbjct 222357 TATTGTTGTACACGCGCAGCATTGGCACCAACCCGTTTGAAATTCCATTCGTGCCCGAGA 222416
Query 131886 TGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAG 131945
|||| | || || || | || ||| ||||| || ||||| || || | |||| |
Sbjct 222417 TGTACGTACCTTTCGCGCGAATACAGTGCACGTTCAGCCCAATTCCGCCAGCAGATTTTG 222476
Query 131946 AGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGT 132005
| || ||||| || | | || || | ||||||||||| | |||||| | | |||
Sbjct 222477 AAATCAGTGCACACTGCTTCAGCGTATCGTAGATACCTTCAATGCTGTCGTCCGACATGG 222536
Query 132006 CGACTAAAAAGCAAGAGGACAACTG 132030
|| || || || || ||||||||
Sbjct 222537 TGAGCAAGAAACAGGACGACAACTG 222561
>seq575
Length=281738
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||||| || | |||| ||| | || || || || ||||| || ||||| |
Sbjct 24172 CCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTATAGTCAGAC 24113
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | || || ||||| ||||||||| | || | |||||| |||||||||||
Sbjct 24112 AGTGTGCGTCCATCCTCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCCGGCGGG 24053
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| ||||| |||||| |||| | || | || || | || || ||
Sbjct 24052 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 23993
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || |||| || ||||| || ||||| || ||||| |||||
Sbjct 23992 TCAAGGGTAATAGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 23946
>seq672
Length=1102954
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| |||| ||| | ||||| || || ||||| |||||||| || |||| |
Sbjct 391589 CGCAGCACCAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCA 391648
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
|| || ||||| ||||||||| | ||||||||||| ||||| || || | || || |||
Sbjct 391649 TCCTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATTCCTTCCTTA 391708
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||||| |||| |||| | ||||| | | || || || || || ||
Sbjct 391709 TCCTGAATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 391768
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||||| || || |||||||| || || |||||
Sbjct 391769 GTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 391803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424927190987904
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