Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq949 122 2e-22 >seq949 Length=1771395 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || |||||||| ||||| || || | |||||| || | || || | |||||| Sbjct 446685 AGGACCAGATGGAGAGTCGATTCCTTCTGAATATTGTAGTCCGACAGCGTACGGCCATCT 446744 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||| ||||| || || || || || || || || || ||||| || Sbjct 446745 TCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCC 446804 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| |||||||| || || | || || || | ||||||||| Sbjct 446805 TGAATCTTGGCCTTAACATTCTCGATGGTATCGGATGGCTCAACCTCCAGGGTGATCGTC 446864 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || | ||| || | ||| | |||||||| Sbjct 446865 TTTCCAGTTAGAGTCTTGACGAAGATCTGCATTTT 446899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192509931206048