Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq672 123 6e-23
seq575 107 4e-18
>seq672
Length=1102954
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| || || |||||||| ||||| || || || |||||||| || | | ||| |
Sbjct 391586 AGTCGCAGCACCAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGG 391645
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
||||| || || || ||||||||||| || | |||||| || | | |||||||||
Sbjct 391646 CCATCCTCCAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCTGGGGGAATTCCTTCC 391705
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || ||||| ||| || ||| | || | |||| ||| ||| || ||||| ||
Sbjct 391706 TTATCCTGAATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTG 391765
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| || |||||||| | ||||||
Sbjct 391766 ATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 391803
>seq575
Length=281738
Score = 107 bits (118), Expect = 4e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || |||||||| || ||||| || || ||||| || || | | || | |||||
Sbjct 24157 AGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTATAGTCAGACAGTGTGCGTCCATCC 24098
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| | | |||||| |||| || ||| || ||||| ||
Sbjct 24097 TCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCCGGCGGGATGCCCTCCTTATCC 24038
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || ||| |||| | | || || ||| || ||||| ||||||||
Sbjct 24037 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATAGTC 23978
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| |||||||| || || ||||||| ||||||
Sbjct 23977 TTACCCGTGAGGGTTTTGACGAAGATCTGCAT 23946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153800221606032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |