Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq628 104 2e-17
>seq628
Length=1452984
Score = 104 bits (114), Expect = 2e-17
Identities = 182/265 (69%), Gaps = 0/265 (0%)
Strand=Plus/Plus
Query 23493 ATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTC 23552
||||||||||| | || ||||| ||||| ||||| |||||||| | ||||| ||
Sbjct 708170 ATACTTAAACATCAGGCAGGCAAAGTCACAGTGTAGTCCTTCATCACGCGAAATCAGCTC 708229
Query 23553 ATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAA 23612
|| || || || | ||| ||||| | ||| || || || | ||| || || || |||||
Sbjct 708230 GTTCGAGAAGGTAAGTCCCGGCATCAGTCCACGCTTCTTCAGCCAGAAAATGGCGGCAAA 708289
Query 23613 TGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGT 23672
||| ||||| ||||| || ||||| ||||| || || | ||| ||||| |
Sbjct 708290 GCTACCGCTGAAGAAGATACCTTCGACAGCAGCAAACGCGACGACACGCTCGCCAAAGTT 708349
Query 23673 TGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAAT 23732
||| || | || ||||| || || ||||| |||||| || || ||| |
Sbjct 708350 TGCCTTCTTGCTTGAGATCCAGTTCAGTGCCCAATCGGCCTTCTTCTTCACGCACGGCAG 708409
Query 23733 TGTTTCAATTGCTTTTAAGAGAAAA 23757
||||||||||| || || || |||
Sbjct 708410 CGTTTCAATTGCATTGAACAGGAAA 708434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521478926108800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |