Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq628 104 2e-17 >seq628 Length=1452984 Score = 104 bits (114), Expect = 2e-17 Identities = 182/265 (69%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 23493 ATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTC 23552 ||||||||||| | || ||||| ||||| ||||| |||||||| | ||||| || Sbjct 708170 ATACTTAAACATCAGGCAGGCAAAGTCACAGTGTAGTCCTTCATCACGCGAAATCAGCTC 708229 Query 23553 ATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAA 23612 || || || || | ||| ||||| | ||| || || || | ||| || || || ||||| Sbjct 708230 GTTCGAGAAGGTAAGTCCCGGCATCAGTCCACGCTTCTTCAGCCAGAAAATGGCGGCAAA 708289 Query 23613 TGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGT 23672 ||| ||||| ||||| || ||||| ||||| || || | ||| ||||| | Sbjct 708290 GCTACCGCTGAAGAAGATACCTTCGACAGCAGCAAACGCGACGACACGCTCGCCAAAGTT 708349 Query 23673 TGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAAT 23732 ||| || | || ||||| || || ||||| |||||| || || ||| | Sbjct 708350 TGCCTTCTTGCTTGAGATCCAGTTCAGTGCCCAATCGGCCTTCTTCTTCACGCACGGCAG 708409 Query 23733 TGTTTCAATTGCTTTTAAGAGAAAA 23757 ||||||||||| || || || ||| Sbjct 708410 CGTTTCAATTGCATTGAACAGGAAA 708434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521478926108800