Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq10535 210 2e-49 >seq10535 Length=3010 Score = 210 bits (232), Expect = 2e-49 Identities = 416/613 (68%), Gaps = 2/613 (0%) Strand=Plus/Plus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA-TAAGACGTA 16856 ||| || || || || || || || |||||| |||||||||||| || | | | || | Sbjct 42 ATCGGCCACGAACTCAATGTACTGCGACATTAGTTCGCAGTTCATGCCAAGCATGTCG-A 100 Query 16857 CCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAG 16916 ||||||| || | ||||| || ||||| || || ||||| || || || | Sbjct 101 CCGGAAGTGCCTTCGTCAGGAACTCCTGCTCGATCACGACCGCATCGCGGATGATCTCCG 160 Query 16917 CAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGC 16976 || || |||| |||||| | || |||| |||||||| || || || || | Sbjct 161 TCACGCGCTCCTTCGACGGTTTCTGCACCAGATACCGGAACATCAGGCAAGCAAAGTCAC 220 Query 16977 AATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTC 17036 | || | ||||||||| | ||| || || || || ||||||| ||| |||||| | Sbjct 221 AGTGCAGTCCCTCGTCGCGCGAGATCAGCTCATTCGAGAATGTCAGCCCCGGCATCAGGC 280 Query 17037 CTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096 | || ||||| | ||| || || || || || ||| ||||| |||||||| || | Sbjct 281 CGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTGAAGAAGATACCCTCAACTG 340 Query 17097 ATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCA 17156 || ||||| | | || || | | | || | ||| | ||||| ||| || Sbjct 341 CAGCGAACGCAACCACACGCTCCCCAAAGTTAGCCTTCTTGCTGGAGATCCAGTTCAGCG 400 Query 17157 CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTT 17216 |||| ||||| || | ||||| ||| || |||||| || || || || | | ||| Sbjct 401 CCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGATCGCGTTGAACAGATACTCCC 460 Query 17217 TTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGT 17276 |||| ||||| ||| ||||| ||||| || || |||||||||| ||| | || Sbjct 461 GCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATTTCGCTGTGCACGT 520 Query 17277 TCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGT 17336 ||||||| || |||||||| ||||| ||||| ||||| |||| | || || ||| | Sbjct 521 TCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCACCTGCACCTCCTGGC 580 Query 17337 AGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATA 17396 ||| || ||| | ||||| ||||| ||||| ||||| ||||||||| || || | || Sbjct 581 TGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGACGCGGCGAAGAAGGCAAGTA 640 Query 17397 TATGCTTAATGAA 17409 ||| ||||| Sbjct 641 CGTGCGAGATGAA 653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517274373759000