Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2530 93.3 3e-14 >seq2530 Length=9775 Score = 93.3 bits (102), Expect = 3e-14 Identities = 229/342 (67%), Gaps = 4/342 (1%) Strand=Plus/Plus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||||||||| || ||||| || | | || ||||| || ||||| ||||| || || Sbjct 1434 AGTGACATGCGCGATCATATGGGTAAGCAACGAGTAGCTTGCGATGTTGAATGGTACACC 1493 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 || |||| ||| || || | |||||||| || || || | | ||| | ||| | Sbjct 1494 CAAGCCCACATCGGCCGACCGTTGATACATCTGGCATGATAATTCTCCGTTGTCAACAAA 1553 Query 101872 AAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCA 101931 ||||||| || ||||||||| || | |||| || || || || || |||||| Sbjct 1554 AAATTGAGCCAAACAATGACAAGGTGGAAGAGCCATATTGGGGATATCGGACGGATTCCA 1613 Query 101932 AGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTA-TAGTATCAATCAACTGTT 101990 || | ||| | || | | ||| ||| || ||||||||| | | || || | || | Sbjct 1614 GGCGCTCATGATGATTCGACGATC-GTACGGGTTGTTTTTAATCTTGTCGATTACCTCTG 1672 Query 101991 TTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTA-TATTCTGCTCCG 102049 | |||||| | |||| || | |||||| | ||| ||| |||| || || Sbjct 1673 CGAGTTGGTCTATCCCTTGCCCAGTGTAATCGT-CATGGCACGTTTTGTATTTGGCCCCA 1731 Query 102050 AAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCT 102091 || || | ||| ||||| || ||||||||||| | ||| ||| Sbjct 1732 AAGTGGCGCCATTGAAAACCGTACACAGGTCCCAAATCACCT 1773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361066614748175