Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq41765 89.7 4e-13 >seq41765 Length=2378 Score = 89.7 bits (98), Expect = 4e-13 Identities = 124/173 (72%), Gaps = 8/173 (5%) Strand=Plus/Plus Query 29041 CCGCTGCACAAAGTCGCGGCCCTTGACGAGCAGCACGTACTCGCAGCGGTCGTACCAGCG 29100 |||||| | || ||||||||||| | ||| ||| || | |||| | ||||||| Sbjct 1328 CCGCTGTATGAACTCGCGGCCCTTCATCAGCTGCAGATAGTGGCAGTTGCTGTACCAGAT 1387 Query 29101 GGCGTGTTGCTGCCACGGCGCGTCGTCGGGTTCCCAATCCTTCAGACCGCCGTCGCAGCA 29160 ||||| |||| ||||||| | ||||| | ||||| |||||||| || ||| | |||| Sbjct 1388 CGCGTGCTGCTCCCACGGCTCATCGTCCTGCTCCCAGTCCTTCAGCCCACCGCCACAGCT 1447 Query 29161 AAAGCAC----CGCGTCTTGTCGCCCTGGCCAGTGTAAAAGAATCCGGCCTCG 29209 |||||| |||| |||| || ||| ||||| || || ||||| ||| Sbjct 1448 GAAGCACTTGACGCG----ATCGCTCTTGCCGGTGTAGAAAAAGCCGGCATCG 1496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422043442043300