Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq10535 499 3e-136
seq14831 84.2 2e-11
>seq10535
Length=3010
Score = 499 bits (552), Expect = 3e-136
Identities = 547/722 (76%), Gaps = 4/722 (1%)
Strand=Plus/Minus
Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714
|||| || || || |||||||| || || |||||||||||||| ||||||| || ||||
Sbjct 742 AGGCGGAAGCTTCCTTCTGGACGGTGGAAGAGGTGGACCTGTCGAAGGACATGAAAGACT 683
Query 116715 GGGAG-CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCC 116773
|||| |||| | | | |||||| || |||||| |||||| || ||||| ||||||
Sbjct 682 GGGAATCGCTCAAGCCG-AGCGAGCGTCACTTCATCTCGCACGTACTTGCCTTCTTCGCC 624
Query 116774 GCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTG 116833
|| ||||| ||||| |||||||||||||| ||||| ||| |||||||||||||||
Sbjct 623 GCGTCGGACGGTATCGTAAACGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGGTG 564
Query 116834 GCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATG 116893
| ||||| || ||||||||||| |||||||| || ||||||||||||||| ||||||
Sbjct 563 ACGGAGGCCCGCTGCTTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAGCGAAATG 504
Query 116894 TATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAAC 116953
|| ||| || |||||||||||| | ||| || ||||| | | |||| |||
Sbjct 503 TACTCGCTGCTGATCGACACGTACATACGCGACCCGAAGGAGCGGGAGTATCTGTTCAAC 444
Query 116954 GCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCC 117013
|| ||||| ||| |||||||||| || |||||||||| ||||||||| ||||||| ||
Sbjct 443 GCGATCGAAACGCTGCCGTGCGTAAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCC 384
Query 117014 GGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTC 117073
||| |||| ||| || ||||| |||| || ||||| || || ||||| |||||
Sbjct 383 AGCAAGAAGGCTAACTTTGGGGAGCGTGTGGTTGCGTTCGCTGCAGTTGAGGGTATCTTC 324
Query 117074 TTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTG 117133
|| ||||| || || ||||| || ||||| ||||| |||||||| ||||| || |||
Sbjct 323 TTCAGTGGCAGCTTTGCGGCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCGGGGCTG 264
Query 117134 ACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTG 117193
|| ||| || ||||| ||||| | |||||||| ||||| || |||||||| || ||
Sbjct 263 ACATTCTCGAATGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCTTGCCTG 204
Query 117194 CTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGAC 117253
||||| | || |||||||| |||| || |||||| | ||||||| || |||
Sbjct 203 ATGTTCCGGTATCTGGTGCAGAAACCGTCGAAGGAGCGCGTGACGGAGATCATCCGCGAT 144
Query 117254 GCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTC-TGCTGGGACT 117312
||||||| ||||||||| ||||| || | || || ||||| || | |||| || |
Sbjct 143 GCGGTCGTGATCGAGCAGGAGTTCCTGACGAAGGCACTTCCGGT-CGACATGCTTGGCAT 85
Query 117313 CAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCT 117372
|| |||||| |||||||| ||||| |||||||| ||||| || || |||| |||||
Sbjct 84 GAACTGCGAACTAATGTCGCAGTACATTGAGTTCGTGGCCGATCGGTTGTTGCTGGAGCT 25
Query 117373 GG 117374
||
Sbjct 24 GG 23
>seq14831
Length=12387
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 40789 GAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAG 40848
||||| ||||| | || ||||| || || |||| ||| ||||| |||||||| ||||
Sbjct 12386 GAGGGAATCCCGCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGA 12327
Query 40849 CGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
||||| || ||| |||||||||||||||||| | || ||||
Sbjct 12326 CGCACTCTGTCCGATTACAACATCCAGAAGGAGTCGACCTTGCA 12283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514949192938000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |