Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq10535 499 3e-136 seq14831 84.2 2e-11 >seq10535 Length=3010 Score = 499 bits (552), Expect = 3e-136 Identities = 547/722 (76%), Gaps = 4/722 (1%) Strand=Plus/Minus Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714 |||| || || || |||||||| || || |||||||||||||| ||||||| || |||| Sbjct 742 AGGCGGAAGCTTCCTTCTGGACGGTGGAAGAGGTGGACCTGTCGAAGGACATGAAAGACT 683 Query 116715 GGGAG-CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCC 116773 |||| |||| | | | |||||| || |||||| |||||| || ||||| |||||| Sbjct 682 GGGAATCGCTCAAGCCG-AGCGAGCGTCACTTCATCTCGCACGTACTTGCCTTCTTCGCC 624 Query 116774 GCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTG 116833 || ||||| ||||| |||||||||||||| ||||| ||| ||||||||||||||| Sbjct 623 GCGTCGGACGGTATCGTAAACGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGGTG 564 Query 116834 GCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATG 116893 | ||||| || ||||||||||| |||||||| || ||||||||||||||| |||||| Sbjct 563 ACGGAGGCCCGCTGCTTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAGCGAAATG 504 Query 116894 TATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAAC 116953 || ||| || |||||||||||| | ||| || ||||| | | |||| ||| Sbjct 503 TACTCGCTGCTGATCGACACGTACATACGCGACCCGAAGGAGCGGGAGTATCTGTTCAAC 444 Query 116954 GCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCC 117013 || ||||| ||| |||||||||| || |||||||||| ||||||||| ||||||| || Sbjct 443 GCGATCGAAACGCTGCCGTGCGTAAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCC 384 Query 117014 GGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTC 117073 ||| |||| ||| || ||||| |||| || ||||| || || ||||| ||||| Sbjct 383 AGCAAGAAGGCTAACTTTGGGGAGCGTGTGGTTGCGTTCGCTGCAGTTGAGGGTATCTTC 324 Query 117074 TTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTG 117133 || ||||| || || ||||| || ||||| ||||| |||||||| ||||| || ||| Sbjct 323 TTCAGTGGCAGCTTTGCGGCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCGGGGCTG 264 Query 117134 ACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTG 117193 || ||| || ||||| ||||| | |||||||| ||||| || |||||||| || || Sbjct 263 ACATTCTCGAATGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCTTGCCTG 204 Query 117194 CTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGAC 117253 ||||| | || |||||||| |||| || |||||| | ||||||| || ||| Sbjct 203 ATGTTCCGGTATCTGGTGCAGAAACCGTCGAAGGAGCGCGTGACGGAGATCATCCGCGAT 144 Query 117254 GCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTC-TGCTGGGACT 117312 ||||||| ||||||||| ||||| || | || || ||||| || | |||| || | Sbjct 143 GCGGTCGTGATCGAGCAGGAGTTCCTGACGAAGGCACTTCCGGT-CGACATGCTTGGCAT 85 Query 117313 CAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCT 117372 || |||||| |||||||| ||||| |||||||| ||||| || || |||| ||||| Sbjct 84 GAACTGCGAACTAATGTCGCAGTACATTGAGTTCGTGGCCGATCGGTTGTTGCTGGAGCT 25 Query 117373 GG 117374 || Sbjct 24 GG 23 >seq14831 Length=12387 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 40789 GAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAG 40848 ||||| ||||| | || ||||| || || |||| ||| ||||| |||||||| |||| Sbjct 12386 GAGGGAATCCCGCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGA 12327 Query 40849 CGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || ||| |||||||||||||||||| | || |||| Sbjct 12326 CGCACTCTGTCCGATTACAACATCCAGAAGGAGTCGACCTTGCA 12283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514949192938000