Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq2530 118 8e-22 >seq2530 Length=9775 Score = 118 bits (130), Expect = 8e-22 Identities = 234/343 (68%), Gaps = 10/343 (3%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGT---- 20273 || |||||||| |||||||| || ||||||||| | || ||||| || |||| Sbjct 1772 GGTGATTTGGGACCTGTGTACGGTTTTCAATGGCGCCACTTTGGGGCCAAATACAAAACG 1713 Query 20274 TGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTT 20333 || ||||| | ||| ||| ||||| |||| ||| | | | || || | Sbjct 1712 TGCCATGACGA----TTACACTGGGCAAGGGATAGACCAACTCGCAGAGGTAATCGACAA 1657 Query 20334 AATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGT 20393 ||||||| ||||| |||| | |||| || | |||||||||| | ||| | Sbjct 1656 GATTAAAAACAACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGTCCGATAT 1597 Query 20394 GCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATG 20452 || |||||| | || || |||||| || | || ||||||| |||| || | Sbjct 1596 CCCCAATATGGCTCTTCCACCTTGTCAT-TGTTTGGCTCAATTTTTTGTTGACAACGGAG 1538 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 |||| || || || ||||||||||| || || ||| |||| ||||||| || ||||| | Sbjct 1537 AATTATCATGCCAGATGTATCAACGGTCGGCCGATGTGGGCTTGGGTGTACCATTCAACA 1478 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 | ||||| || || ||||||| ||||||| || ||||| || Sbjct 1477 TCGCAAGCTACTCGTTGCTTACCCATATGATCGCGCATGTCAC 1435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398980032569125