Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq10535 324 1e-83
seq40490 86.0 6e-12
>seq10535
Length=3010
Score = 324 bits (358), Expect = 1e-83
Identities = 510/724 (70%), Gaps = 10/724 (1%)
Strand=Plus/Minus
Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648
|||| ||||| || || ||||| || ||||| || |||||||| ||||| ||| || |
Sbjct 742 AGGCGGAAGCTTCCTTCTGGACGGTGGAAGAGGTGGACCTGTCGAAGGACATGAAAGACT 683
Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCG 57708
|||| || ||||| ||| | | || || ||||| | || || |||||||
Sbjct 682 GGGAATCGCTCAAGCCGAGCGAGCGTCACTTCATCTCGCACGTACTTGCCTTCTTCGCCG 623
Query 57709 CATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768
| || || ||||| || ||||||||| |||| || | || || || ||||| ||||
Sbjct 622 CGTCGGACGGTATCGTAAACGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGGTGA 563
Query 57769 CGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGT 57828
||||||| | ||||| ||||| ||||| | || || || |||||||| |||||||
Sbjct 562 CGGAGGCCCGCTGCTTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAGCGAAATGT 503
Query 57829 ATTCGCTACTCATCGATACGTACGTGAAGGAC---AACGA-CGAGAAACGTAGACTGTTC 57884
| ||||| || ||||| |||||| | ||| || || || || ||| ||||||
Sbjct 502 ACTCGCTGCTGATCGACACGTACATACGCGACCCGAAGGAGCGGGA---GTAT-CTGTTC 447
Query 57885 AACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGAT 57943
|||||||||||||| |||| ||| | |||||||| || ||| | | || |||||
Sbjct 446 AACGCGATCGAAACGCTGCCGTGCG-TAAAGAAGAAGGCCGACTGGGCGCTGAACTGGAT 388
Query 57944 AAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTAT 58003
||| | ||| | || | ||| | | | |||||||| || || || |||||
Sbjct 387 CTCCAGCAAGAAGGCTAACTTTGGGGAGCGTGTGGTTGCGTTCGCTGCAGTTGAGGGTAT 328
Query 58004 ATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGG 58063
||||| |||||||||||||| || || ||| ||||||| |||||||||||||| ||
Sbjct 327 CTTCTTCAGTGGCAGCTTTGCGGCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCGGG 268
Query 58064 CCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTG 58123
||||| || || ||| |||| |||||||||||||| || || ||| ||||| ||
Sbjct 267 GCTGACATTCTCGAATGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCTTG 208
Query 58124 CCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCAC 58183
||| |||| | | | || | |||||| || ||| ||| | ||| || |||
Sbjct 207 CCTGATGTTCCGGTATCTGGTGCAGAAACCGTCGAAGGAGCGCGTGACGGAGATCATCCG 148
Query 58184 CGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGG 58243
||| ||||||| |||||| | ||||| | || | || || ||||| | |||||| ||
Sbjct 147 CGATGCGGTCGTGATCGAGCAGGAGTTCCTGACGAAGGCACTTCCGGTCGACATGCTTGG 88
Query 58244 TATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGA 58303
|||||| || | ||||| ||||||||||||| || ||||| | | ||||| ||
Sbjct 87 CATGAACTGCGAACTAATGTCGCAGTACATTGAGTTCGTGGCCGATCGGTTGTTGCTGGA 28
Query 58304 ACTG 58307
|||
Sbjct 27 GCTG 24
>seq40490
Length=2651
Score = 86.0 bits (94), Expect = 6e-12
Identities = 168/244 (69%), Gaps = 12/244 (5%)
Strand=Plus/Minus
Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243
||| ||| |||||| ||||| ||||| || || || || |||||||| ||| |||| ||
Sbjct 653 GAAGCAATCATGCAGATTTTTGTAAAAACCCTAACCGGGAAAACGATTACCCTCGATGTC 594
Query 31244 GAACCGTCCGACA--GTG-TCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTG 31300
|||| | | ||| | || | ||||| | ||||| ||| ||||| |
Sbjct 593 ATCGCGTCGCAAACGGTGCTTGACA---TCAAAAGCAAAATAGAGGAACGTGAAGGAATT 537
Query 31301 CCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTG---GAAGACTCTATGACT 31357
|||||||||| |||||| | || || |||||||| ||| || || ||| || |
Sbjct 536 GCGCCCGACCAACAGCGTATCATCTTTGCTGGCAAGCAGCTGAACGATGACCGAAT---T 480
Query 31358 ATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGC 31417
|| ||||| ||||| || | | |||||| | ||||||||||| || ||| |||
Sbjct 479 ATCTCTGATTACAACATACAGCATGGATCGACGATGCATCTGGTACTGCGATTGAAGGGA 420
Query 31418 GGTA 31421
||||
Sbjct 419 GGTA 416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445532790546000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |