Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2530 114 3e-20
seq10535 91.5 3e-13
>seq2530
Length=9775
Score = 114 bits (126), Expect = 3e-20
Identities = 225/330 (68%), Gaps = 2/330 (1%)
Strand=Plus/Minus
Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455
|| ||||||||||| || ||||| || |||||||| || ||||| || |||| | ||
Sbjct 1772 GGTGATTTGGGACCTGTGTACGGTTTTCAATGGCGCCACTTTGGGGCCAAATACAAAACG 1713
Query 35456 TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTG 35515
|| | |||||| ||||| | || || || ||| | || | || | | | |
Sbjct 1712 TGCCATGACGATTACACTGGGCAAGGGATAGACCAACTCGCAGAGGTAATCGACAAGATT 1653
Query 35516 AGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCAC 35575
| | | || || | ||| | | || || |||| || |||||||| ||| | | |
Sbjct 1652 AAAAACAACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGTCCGATATCCCC 1593
Query 35576 CTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATGTGGCTAATGGAGAATT 35634
|||||||||||| || || || || | |||||||||| ||| | || ||||||||
Sbjct 1592 AATATGGCTCTTCCACCTTGTCA-TTGTTTGGCTCAATTTTTTGTTGACAACGGAGAATT 1534
Query 35635 GTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694
|| |||||| ||||||| || | ||||| || ||||| || || ||||| || ||
Sbjct 1533 ATCATGCCAGATGTATCAACGGTCGGCCGATGTGGGCTTGGGTGTACCATTCAACATCGC 1474
Query 35695 ATCATACTCTCTTCTGACTCATCTGATGGC 35724
| ||||| | || || ||| |||| ||
Sbjct 1473 AAGCTACTCGTTGCTTACCCATATGATCGC 1444
>seq10535
Length=3010
Score = 91.5 bits (100), Expect = 3e-13
Identities = 153/221 (69%), Gaps = 3/221 (1%)
Strand=Plus/Minus
Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGCGGAA 101911
|||||||||| | ||||| | || ||||| ||||| || | | || | |||
Sbjct 419 AAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCCAGCAAGAAGGCTAACTTTGGGGAG 360
Query 101912 CTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATT 101971
| | ||||| || ||||||||||| || |||||||| ||||| || || ||||
Sbjct 359 CGTGTGGTTGCGTTCGCTGCAGTTGAGGGTATCTTCTTCAGTGGCAGCTTTGCGGCCATC 300
Query 101972 TTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCT 102031
|||||| | ||||| | || | |||| || || || | ||| |||||| | || ||
Sbjct 299 TTCTGGCTGAAGAAGCGCGGCCTGATGCCGGGGCTGACATTCTCGAATGAGCTGATCTCG 240
Query 102032 AGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
| ||||| || || || | |||||||| ||| || ||||
Sbjct 239 CGCGACGAGGGACTGCACTGTGACTTTGCTTGCCTGATGTT 199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989052431038375
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |