Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2530 114 3e-20 seq10535 91.5 3e-13 >seq2530 Length=9775 Score = 114 bits (126), Expect = 3e-20 Identities = 225/330 (68%), Gaps = 2/330 (1%) Strand=Plus/Minus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455 || ||||||||||| || ||||| || |||||||| || ||||| || |||| | || Sbjct 1772 GGTGATTTGGGACCTGTGTACGGTTTTCAATGGCGCCACTTTGGGGCCAAATACAAAACG 1713 Query 35456 TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTG 35515 || | |||||| ||||| | || || || ||| | || | || | | | | Sbjct 1712 TGCCATGACGATTACACTGGGCAAGGGATAGACCAACTCGCAGAGGTAATCGACAAGATT 1653 Query 35516 AGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCAC 35575 | | | || || | ||| | | || || |||| || |||||||| ||| | | | Sbjct 1652 AAAAACAACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGTCCGATATCCCC 1593 Query 35576 CTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATGTGGCTAATGGAGAATT 35634 |||||||||||| || || || || | |||||||||| ||| | || |||||||| Sbjct 1592 AATATGGCTCTTCCACCTTGTCA-TTGTTTGGCTCAATTTTTTGTTGACAACGGAGAATT 1534 Query 35635 GTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694 || |||||| ||||||| || | ||||| || ||||| || || ||||| || || Sbjct 1533 ATCATGCCAGATGTATCAACGGTCGGCCGATGTGGGCTTGGGTGTACCATTCAACATCGC 1474 Query 35695 ATCATACTCTCTTCTGACTCATCTGATGGC 35724 | ||||| | || || ||| |||| || Sbjct 1473 AAGCTACTCGTTGCTTACCCATATGATCGC 1444 >seq10535 Length=3010 Score = 91.5 bits (100), Expect = 3e-13 Identities = 153/221 (69%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGCGGAA 101911 |||||||||| | ||||| | || ||||| ||||| || | | || | ||| Sbjct 419 AAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCCAGCAAGAAGGCTAACTTTGGGGAG 360 Query 101912 CTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATT 101971 | | ||||| || ||||||||||| || |||||||| ||||| || || |||| Sbjct 359 CGTGTGGTTGCGTTCGCTGCAGTTGAGGGTATCTTCTTCAGTGGCAGCTTTGCGGCCATC 300 Query 101972 TTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCT 102031 |||||| | ||||| | || | |||| || || || | ||| |||||| | || || Sbjct 299 TTCTGGCTGAAGAAGCGCGGCCTGATGCCGGGGCTGACATTCTCGAATGAGCTGATCTCG 240 Query 102032 AGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 | ||||| || || || | |||||||| ||| || |||| Sbjct 239 CGCGACGAGGGACTGCACTGTGACTTTGCTTGCCTGATGTT 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989052431038375