Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq10535 152 7e-32 >seq10535 Length=3010 Score = 152 bits (168), Expect = 7e-32 Identities = 363/546 (66%), Gaps = 7/546 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 ||||||| || || || || |||||||| |||||||| | || || || || || Sbjct 199 AACATCAGGCAAGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCATTCGAG 258 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| ||||| ||||| || ||||| || |||| |||||| ||| Sbjct 259 AATGTCAGCCCCGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCA 318 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 |||||||| || || ||||| || || ||||| | | ||| ||| | | || || Sbjct 319 CTGAAGAAGATACCCTCAACTGCAGCGAACGCAACCACACGCTCCCCAAAGTTAGC-CT- 376 Query 50131 TCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 || || ||||| || | ||||| ||||||||||| ||||| || |||| ||||| Sbjct 377 TCTTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTT 436 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 | || || || || ||||| | || || || | || || ||||||| | Sbjct 437 CGATCGCGTTGAACAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCA 496 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 | |||||||| || | ||| || || || |||||||| |||||||| || | | Sbjct 497 GCGAGTACATTTCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGG 556 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGT 50365 |||| || | |||||| || | || || || | | ||| || || || || |||| Sbjct 557 CCTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGT 616 Query 50366 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTT 50425 | || || || || || | ||| || || || || ||| | || | || Sbjct 617 CCGACGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGGCTTGAGCG 676 Query 50426 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 50485 | ||| || || || || || || | || || |||||||| ||||| || || || | Sbjct 677 ATTCCCAGTCTTTCATGTCCTTCGACAGGTCCACCTCTTCCACCGTCCAGAAGGAAGCTT 736 Query 50486 CTGCCT 50491 | |||| Sbjct 737 CCGCCT 742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717892382257000