Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq10535 93.3 4e-14 >seq10535 Length=3010 Score = 93.3 bits (102), Expect = 4e-14 Identities = 238/358 (66%), Gaps = 6/358 (2%) Strand=Plus/Plus Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931 || ||||| ||||| || || ||||| || | || || || || || ||||| | Sbjct 208 CAAGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCATTCGAGAATGTCAGC 267 Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAA--TGACCCGGAAAAGA 13989 || ||||||| || || || || | ||| || || || ||||| || | | ||| || Sbjct 268 CCCGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTGAA--GA 325 Query 13990 ATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCG 14049 | || |||||||||||||| ||||| | | || || ||||| || || ||| | | Sbjct 326 AGATACCCTCAACTGCAGCGAACGCAACCACACGCTCCCCAAAGTTAGCCTTCTTGCTGG 385 Query 14050 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14109 | ||||| || ||||| || | || || || | | || ||||| || || | Sbjct 386 AGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGATCGCGT 445 Query 14110 TAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA-TAC 14168 | || | ||| ||| ||| || | ||||| || || || || ||| | ||| Sbjct 446 TGAACAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAG-CAGCGAGTAC 504 Query 14169 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG 14226 ||||| ||| | ||| ||||| || |||||||| || || ||||| | || |||| Sbjct 505 ATTTCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCG 562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479476592545000