Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq34660 140 3e-28 >seq34660 Length=3128 Score = 140 bits (154), Expect = 3e-28 Identities = 202/285 (71%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 5503 GCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTC 5562 ||| || || || ||||| || ||||| | ||||| || ||| ||| | |||||| Sbjct 1451 GCCAGTCGATCCAAATCCTCCAGCGCCACGATCCGTGTCCGTCAGCGACGGTAGCTCTTC 1510 Query 5563 CACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTAC 5622 || || || | || |||||||| | ||||| || || || ||| |||| || Sbjct 1511 CAAGTCCGGATAAGCTATCTTTTCGCAGATAAATTGCGCAATACGATCACCCTTCTTCAC 1570 Query 5623 CTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGC 5682 |||||||| | | | |||||||||||| || || ||||| || |||||||| | Sbjct 1571 TTCGAAATCCACCTCGGAGTGGTTGAACAGCACAACACCAACGTTTCCCCGGTAGTCCTC 1630 Query 5683 GTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742 ||| | ||||| || ||||| |||||||||| || |||||||| |||||||| || || Sbjct 1631 GTCAACGACGCCTGCCCCCACATCGATGAAGTTTTTCACCGCCAGCCCGGAGCGTGGTGC 1690 Query 5743 CACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGT 5787 || || ||||| || || || || | ||| | ||| | ||| || Sbjct 1691 TACACGCCCGTAACAGCCTTCCGGTACCTGCACCTGGATGTCGGT 1735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429834659000600