Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq39814 91.5 8e-14 seq10136 87.8 9e-13 seq1530 87.8 9e-13 seq37612 84.2 1e-11 seq18648 84.2 1e-11 seq17097 84.2 1e-11 seq3353 84.2 1e-11 >seq39814 Length=1359 Score = 91.5 bits (100), Expect = 8e-14 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| | || |||||| | || |||||||||| |||||||||||||||||||||||| Sbjct 444 AAAAGAACACATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGAC 385 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| |||| |||||||| | |||| Sbjct 384 GCTCTAACCAGCTGAGCTATGGAGCCG 358 >seq10136 Length=10577 Score = 87.8 bits (96), Expect = 9e-13 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| | ||||||||||||| ||||||||||||||||||||||||||||| |||| | Sbjct 5402 TGGCTCCAGAAAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 5343 Query 11516 TGAGCTA 11522 ||||||| Sbjct 5342 TGAGCTA 5336 >seq1530 Length=21162 Score = 87.8 bits (96), Expect = 9e-13 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 ||||||| | || |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 5439 AATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACC 5380 Query 11513 AACTGAGCTA 11522 | |||||||| Sbjct 5379 AGCTGAGCTA 5370 >seq37612 Length=2842 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| | || |||||||||| ||||||||||||||||||||||||||||| |||| | Sbjct 1512 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 1571 Query 11516 TGAGCTAATGGGCCG 11530 ||||||| | |||| Sbjct 1572 TGAGCTATGGAGCCG 1586 Score = 82.4 bits (90), Expect = 4e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| | || |||||||||| ||||||||||||||||||||||||||||| |||| | Sbjct 811 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 870 Query 11516 TGAGCTA 11522 ||||||| Sbjct 871 TGAGCTA 877 >seq18648 Length=1376 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| | || |||||||||| ||||||||||||||||||||||||||||| |||| | Sbjct 1165 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 1106 Query 11516 TGAGCTAATGGGCCG 11530 ||||||| | |||| Sbjct 1105 TGAGCTATGGAGCCG 1091 >seq17097 Length=1009 Score = 84.2 bits (92), Expect = 1e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || |||| | || |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 342 AACTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACC 283 Query 11513 AACTGAGCTA 11522 | |||||||| Sbjct 282 AGCTGAGCTA 273 Score = 84.2 bits (92), Expect = 1e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||| | || |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 819 TTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAG 760 Query 11515 CTGAGCTA 11522 |||||||| Sbjct 759 CTGAGCTA 752 >seq3353 Length=21700 Score = 84.2 bits (92), Expect = 1e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||| | || |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 12637 TTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAG 12578 Query 11515 CTGAGCTA 11522 |||||||| Sbjct 12577 CTGAGCTA 12570 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261357588211300