Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq10535 111 1e-19 seq20716 109 5e-19 seq14831 109 5e-19 >seq10535 Length=3010 Score = 111 bits (122), Expect = 1e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 46085 TGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGA 46144 |||||||||| ||||| ||||||||||| |||| |||||| ||||| | || | Sbjct 430 TGCCGTGCGTAAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCCAGCAAGAAGGCTA 371 Query 46145 CTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTT 46204 || | |||||| |||| || || || || ||||| |||| || |||||| | Sbjct 370 ACTTTGGGGAGCGTGTGGTTGCGTTCGCTGCAGTTGAGGGTATCTTCTTCAGTGGCAGCT 311 Query 46205 TTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACG 46264 |||| |||||||| | | || | ||| | ||||| || ||||| || || | Sbjct 310 TTGCGGCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCGGGGCTGACATTCTCGAATG 251 Query 46265 AGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT 46310 ||||||| |||||||||||||| ||||| |||||||| || || Sbjct 250 AGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCTTGCCT 205 >seq20716 Length=12815 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| |||| | ||||||||| || || ||||| || || ||| Sbjct 5 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATACCCTCCTTG 64 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| ||| ||| | | ||| | ||||| | || ||||| || | ||||| | Sbjct 65 TCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 124 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || ||||| || || ||||| ||||| |||||||| Sbjct 125 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 159 >seq14831 Length=12387 Score = 109 bits (120), Expect = 5e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || || || | |||||||||||| || |||||||||||| | Sbjct 12259 CCACCGCGAAGCCGAAGAACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGGAC 12318 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | ||||||||| || || ||| Sbjct 12319 AGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 12378 Query 131128 ATTCCTTC 131135 ||||| || Sbjct 12379 ATTCCCTC 12386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471765435792000