Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq6811 176 3e-39 >seq6811 Length=10561 Score = 176 bits (194), Expect = 3e-39 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221 |||| ||| | ||||| |||||||| ||| | || |||||||| ||||| ||||| Sbjct 6876 ATGGCAACCGTAAACGTGAATCGTAACGTGACCGATATCTTCTACCGGTACAAGATGCCT 6935 Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281 |||||| |||||||| |||||||| ||||||||||| || || || || || |||||| Sbjct 6936 CGCATCAATGCCAAGGTAGAGGGTAAAGGAAACGGTATCAAGACGGTGATCGTGAACATG 6995 Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGC 6341 | ||||| || ||| |||| || || || ||||||||||| || || ||||| ||| Sbjct 6996 GCGGAAGTGGCCCGAGCGATCGGTCGTCCCGCTACCTACCCGACCAAGTACTTCGGTTGC 7055 Query 6342 GAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373 |||||||| || || ||||||||||| ||||| Sbjct 7056 GAACTTGGAGCGCAAACGCAGTTTGACCACAA 7087 Score = 89.7 bits (98), Expect = 3e-13 Identities = 193/287 (67%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 ||||| |||||||| || || || |||| | | |||||||||||||| | | || Sbjct 7752 AACGAACGCTTCATTGTGAATGGTGCGCACGATGCCGCCAAGCTGCAGGATCTGTTGGAT 7811 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATT 6494 ||||| ||||| || || ||||| | ||| ||||| |||||||| || || || | Sbjct 7812 GGCTTCATTCGTCGTTTCGTCCTGTGCCCGGAGTGCGACAACCCGGAAACGGATCTGCTG 7871 Query 6495 GTGTCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAG 6554 ||||| | |||| || ||||| ||||| ||||| || || || | ||| || Sbjct 7872 GTGTCGTCAAAGAAGGGTACGATCTCGCAGGGATGCAAGGCCTGTGGCTTCCACGGTCCC 7931 Query 6555 CTGGATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC--ACCTAAAGACC 6612 || || | || || | ||||| ||||| | ||||| || || || | | ||| Sbjct 7932 CTCGAGGTGAACCATAAGGTGAACACGTTCATCATCAAGAACCCACCGAACGTGA--ACC 7989 Query 6613 CTAGCACGCAGGGTTCTTCGCAAAATAAGAGCAACCGTGGCAAGCGC 6659 | | |||||| |||||| | || |||| || |||||||| Sbjct 7990 CGGCGAGCCAGGGTGCTTCGCTGACCGAGGGCAAGCGCAGCAAGCGC 8036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334776055064675