Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq6811 176 3e-39
>seq6811
Length=10561
Score = 176 bits (194), Expect = 3e-39
Identities = 166/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221
|||| ||| | ||||| |||||||| ||| | || |||||||| ||||| |||||
Sbjct 6876 ATGGCAACCGTAAACGTGAATCGTAACGTGACCGATATCTTCTACCGGTACAAGATGCCT 6935
Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281
|||||| |||||||| |||||||| ||||||||||| || || || || || ||||||
Sbjct 6936 CGCATCAATGCCAAGGTAGAGGGTAAAGGAAACGGTATCAAGACGGTGATCGTGAACATG 6995
Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGC 6341
| ||||| || ||| |||| || || || ||||||||||| || || ||||| |||
Sbjct 6996 GCGGAAGTGGCCCGAGCGATCGGTCGTCCCGCTACCTACCCGACCAAGTACTTCGGTTGC 7055
Query 6342 GAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373
|||||||| || || ||||||||||| |||||
Sbjct 7056 GAACTTGGAGCGCAAACGCAGTTTGACCACAA 7087
Score = 89.7 bits (98), Expect = 3e-13
Identities = 193/287 (67%), Gaps = 4/287 (1%)
Strand=Plus/Plus
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
||||| |||||||| || || || |||| | | |||||||||||||| | | ||
Sbjct 7752 AACGAACGCTTCATTGTGAATGGTGCGCACGATGCCGCCAAGCTGCAGGATCTGTTGGAT 7811
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATT 6494
||||| ||||| || || ||||| | ||| ||||| |||||||| || || || |
Sbjct 7812 GGCTTCATTCGTCGTTTCGTCCTGTGCCCGGAGTGCGACAACCCGGAAACGGATCTGCTG 7871
Query 6495 GTGTCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAG 6554
||||| | |||| || ||||| ||||| ||||| || || || | ||| ||
Sbjct 7872 GTGTCGTCAAAGAAGGGTACGATCTCGCAGGGATGCAAGGCCTGTGGCTTCCACGGTCCC 7931
Query 6555 CTGGATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC--ACCTAAAGACC 6612
|| || | || || | ||||| ||||| | ||||| || || || | | |||
Sbjct 7932 CTCGAGGTGAACCATAAGGTGAACACGTTCATCATCAAGAACCCACCGAACGTGA--ACC 7989
Query 6613 CTAGCACGCAGGGTTCTTCGCAAAATAAGAGCAACCGTGGCAAGCGC 6659
| | |||||| |||||| | || |||| || ||||||||
Sbjct 7990 CGGCGAGCCAGGGTGCTTCGCTGACCGAGGGCAAGCGCAGCAAGCGC 8036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334776055064675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |