Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq35382 158 1e-33 >seq35382 Length=6325 Score = 158 bits (174), Expect = 1e-33 Identities = 324/474 (68%), Gaps = 16/474 (3%) Strand=Plus/Minus Query 50982 CACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTT 51041 ||||| |||||| ||||| ||||| |||||||||| || | ||| |||||||||||| Sbjct 3899 CACGTCAAACTTTCGCTTGCAGCCGTCGTAGTTCATGTAGCGAATTTTGCCAAAAATTTC 3840 Query 51042 GCGTTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACATAAT 51100 || || || | |||| || || | ||| || |||||||| || || || || Sbjct 3839 CCGCTCCTTCCA-TCCCTGATCATGGATGCCGGCGATCGACCACATGCACCCGACGTATC 3781 Query 51101 TGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATG 51160 ||| |||||||| ||||||| |||||| ||||||| ||| | ||||| | | | Sbjct 3780 CGTTCGGATCGCGCCCATCCAGGCTGTAGCGATCGTTCAGATAGATGGCCGTTTCGAGCG 3721 Query 51161 CCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAAC 51220 | || | | |||||| || | |||||||| ||||| |||||||||| | | | Sbjct 3720 CTTCCTCGGGCGTTTTCGTCCACTCGAGTATTTTCTTCGCCCAATACATGCGCAGGAACC 3661 Query 51221 CGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTG 51278 ||||||||||| |||| || | |||||| ||||| | |||||||| |||||||| Sbjct 3660 CGTGCATCTTGGCCTCCTTCACC--AGCTGCAGCTGAGCTGCGTTCCACAGGTCGTCGTG 3603 Query 51279 AGTTTGGCAACTTGCCAGCTCTGTCAAATTGTAAATGTATGAGCGATGATCGTATTTGTG 51338 || ||| | || | |||||| | |||| || || | ||| |||| | Sbjct 3602 GGTGTGGGCAGTTTCTAGCTCTTCCCGCGTGTAGCAATACACACGCTTATC---TTTGCG 3546 Query 51339 TTGCTCG---ATCGTTTCTTGAGCCCATTGTGGT--GCGCCTTCAACACAGTCGTAGCGG 51393 || ||| | ||||| | ||||| || || || || | | ||||||| Sbjct 3545 GTGATCGTCCAGCGTTTTGCGCGCCCA--GTCGTACGCACCAGCCAGGTTGTCGTAGTTT 3488 Query 51394 TCGTTGTAGAAACAAAAATTGTCGGCCAGTTCGCGGCGTACCACGACTTCGTCG 51447 | |||| ||| ||||| ||||| | ||||||||||||||| | |||| ||| Sbjct 3487 TTATTGTGGAAGCAAAAGTTGTCCGACAGTTCGCGGCGTACGATCGCTTCCTCG 3434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433106586318875