Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq40490 91.5 1e-13
seq20716 89.7 4e-13
>seq40490
Length=2651
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| ||||| ||||||| |||||| | || || || || | |
Sbjct 644 ATGCAGATTTTTGTAAAAACCCTAACCGGGAAAACGATTACCCTCGATGTCATCGCGTCG 585
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
| || ||| || |||||| ||||| | || || || ||| | ||||| |||
Sbjct 584 CAAACGGTGCTTGACATCAAAAGCAAAATAGAGGAACGTGAAGGAATTGCGCCCGACCAA 525
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || ||||| ||||| ||| | | ||| |||| | |||| |||||||||
Sbjct 524 CAGCGTATCATCTTTGCTGGCAAGCAGCTGAACGATGACCGAATTATCTCTGATTACAAC 465
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || | | ||| || || ||| | || |||||||| ||||||
Sbjct 464 ATACAGCATGGATCGACGATGCATCTGGTACTGCGATTGAAGGGAGGT 417
>seq20716
Length=12815
Score = 89.7 bits (98), Expect = 4e-13
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || || || ||||| | || ||||| || | || ||||| || || ||
Sbjct 162 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 103
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||||| | || || | || || || || |||||||||||||| || || |||
Sbjct 102 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCAGAT 43
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374
|| || ||||| || || |||||||| ||| | ||||||
Sbjct 42 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGAT 4
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419513535387625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |