Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq40490 91.5 1e-13 seq20716 89.7 4e-13 >seq40490 Length=2651 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| ||||||| |||||| | || || || || | | Sbjct 644 ATGCAGATTTTTGTAAAAACCCTAACCGGGAAAACGATTACCCTCGATGTCATCGCGTCG 585 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 | || ||| || |||||| ||||| | || || || ||| | ||||| ||| Sbjct 584 CAAACGGTGCTTGACATCAAAAGCAAAATAGAGGAACGTGAAGGAATTGCGCCCGACCAA 525 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || ||||| ||||| ||| | | ||| |||| | |||| ||||||||| Sbjct 524 CAGCGTATCATCTTTGCTGGCAAGCAGCTGAACGATGACCGAATTATCTCTGATTACAAC 465 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || | | ||| || || ||| | || |||||||| |||||| Sbjct 464 ATACAGCATGGATCGACGATGCATCTGGTACTGCGATTGAAGGGAGGT 417 >seq20716 Length=12815 Score = 89.7 bits (98), Expect = 4e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || ||||| | || ||||| || | || ||||| || || || Sbjct 162 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 103 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || |||||||||||||| || || ||| Sbjct 102 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCAGAT 43 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374 || || ||||| || || |||||||| ||| | |||||| Sbjct 42 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGAT 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419513535387625