Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq16794 104 5e-17 seq1607 93.3 9e-14 seq39139 91.5 3e-13 seq38082 91.5 3e-13 seq23518 91.5 3e-13 seq18011 91.5 3e-13 seq37411 89.7 1e-12 seq32789 89.7 1e-12 seq24173 89.7 1e-12 seq22577 89.7 1e-12 seq1824 89.7 1e-12 seq950 89.7 1e-12 >seq16794 Length=6728 Score = 104 bits (114), Expect = 5e-17 Identities = 213/313 (68%), Gaps = 8/313 (3%) Strand=Plus/Minus Query 218565 GCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGC 218624 |||||| || || || || |||| || || ||||| ||||| ||| | || || | Sbjct 654 GCGTTCGATCCCGTGCATGCTGGACGGGCTGAAGCCGGGCCAGCGGAAGGTGCTGTTCAC 595 Query 218625 CGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATC 218684 |||||||| ||| | || | ||||| || ||| | | || | || | Sbjct 594 GTGCTTCAAGCGCAACGACAAGCGCGAGGTGAAGGTGGCCCAGCTGGCGGGCTCGGTGGC 535 Query 218685 CGAAATTTCTGGCTACCATCACGGTGAGCAGAG--TCTGCAGGGTGCCATTGTAGGCATG 218742 ||||| || | |||||| ||||| |||||| ||||| | | || | | || Sbjct 534 GGAAATGTCCGCCTACCACCACGGCGAGCAGTCGCTCTGCTCGACG--ATCATCAACCTG 477 Query 218743 GCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGT 218802 || ||| |||| ||||||||||||||||| ||| ||||| ||| ||||||||| ||| Sbjct 476 GCGCAGAACTACGTGGGCAGTAACAACATCAACCTGCTGTACCCGGGCGGTCAGTTCGGT 417 Query 218803 TCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCC--AGGTATATCTTTACAAAGTTGT 218860 | || || ||| || |||||||| || | ||| ||||| ||||| || | | ||| Sbjct 416 ACGCGGCTGACGGGCGGCAAGGATAGCGC--CAGCCCGAGGTACATCTTCACGATGATGT 359 Query 218861 CGCCCGTGACGCG 218873 || || ||||||| Sbjct 358 CGGCCCTGACGCG 346 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895 |||||| ||||||||||| ||||||||||| || ||| |||| | || || | Sbjct 1431 CTGCACGCTCATCCTGACCGAGGGAGACTCGGCCAAAACGTTGGCCGTGTCGGGGCTGGG 1372 Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955 ||||| ||||| || | ||| ||| | || || || || ||||||||||| |||||||| Sbjct 1371 GGTGGTCGGTCGCGACACGTACGGTGTGTTTCCGCTGCGCGGTAAGCTGCTGAACGTGCG 1312 Query 217956 CGATGC 217961 || || Sbjct 1311 GGAAGC 1306 >seq1607 Length=7712 Score = 93.3 bits (102), Expect = 9e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559 || ||||||| |||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 475 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 534 Query 142560 GAGCCCCACATCGGGC 142575 ||||||||| | |||| Sbjct 535 GAGCCCCACGTTGGGC 550 >seq39139 Length=3583 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1993 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1934 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 1933 CCCCACGTTGGGC 1921 >seq38082 Length=16389 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 3342 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3401 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 3402 CCCCACGTTGGGC 3414 >seq23518 Length=2533 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 193 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 134 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 133 CCCCACGTTGGGC 121 >seq18011 Length=2861 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1360 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1301 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 1300 CCCCACGTTGGGC 1288 >seq37411 Length=7051 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 5489 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5430 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 5429 CCCACGTTGGGC 5418 >seq32789 Length=1911 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1911 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1852 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1851 CCCACGTTGGGC 1840 >seq24173 Length=5087 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2671 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2612 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 2611 CCCACGTTGGGC 2600 >seq22577 Length=8447 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2321 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2380 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 2381 CCCACGTTGGGC 2392 >seq1824 Length=3090 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 895 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 954 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 955 CCCACGTTGGGC 966 >seq950 Length=7445 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 5559 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5500 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 5499 CCCACGTTGGGC 5488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027284683008925