Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19]
41,925 sequences; 151,110,088 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq16794 104 5e-17
seq1607 93.3 9e-14
seq39139 91.5 3e-13
seq38082 91.5 3e-13
seq23518 91.5 3e-13
seq18011 91.5 3e-13
seq37411 89.7 1e-12
seq32789 89.7 1e-12
seq24173 89.7 1e-12
seq22577 89.7 1e-12
seq1824 89.7 1e-12
seq950 89.7 1e-12
>seq16794
Length=6728
Score = 104 bits (114), Expect = 5e-17
Identities = 213/313 (68%), Gaps = 8/313 (3%)
Strand=Plus/Minus
Query 218565 GCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGC 218624
|||||| || || || || |||| || || ||||| ||||| ||| | || || |
Sbjct 654 GCGTTCGATCCCGTGCATGCTGGACGGGCTGAAGCCGGGCCAGCGGAAGGTGCTGTTCAC 595
Query 218625 CGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATC 218684
|||||||| ||| | || | ||||| || ||| | | || | || |
Sbjct 594 GTGCTTCAAGCGCAACGACAAGCGCGAGGTGAAGGTGGCCCAGCTGGCGGGCTCGGTGGC 535
Query 218685 CGAAATTTCTGGCTACCATCACGGTGAGCAGAG--TCTGCAGGGTGCCATTGTAGGCATG 218742
||||| || | |||||| ||||| |||||| ||||| | | || | | ||
Sbjct 534 GGAAATGTCCGCCTACCACCACGGCGAGCAGTCGCTCTGCTCGACG--ATCATCAACCTG 477
Query 218743 GCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGT 218802
|| ||| |||| ||||||||||||||||| ||| ||||| ||| ||||||||| |||
Sbjct 476 GCGCAGAACTACGTGGGCAGTAACAACATCAACCTGCTGTACCCGGGCGGTCAGTTCGGT 417
Query 218803 TCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCC--AGGTATATCTTTACAAAGTTGT 218860
| || || ||| || |||||||| || | ||| ||||| ||||| || | | |||
Sbjct 416 ACGCGGCTGACGGGCGGCAAGGATAGCGC--CAGCCCGAGGTACATCTTCACGATGATGT 359
Query 218861 CGCCCGTGACGCG 218873
|| || |||||||
Sbjct 358 CGGCCCTGACGCG 346
Score = 84.2 bits (92), Expect = 4e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895
|||||| ||||||||||| ||||||||||| || ||| |||| | || || |
Sbjct 1431 CTGCACGCTCATCCTGACCGAGGGAGACTCGGCCAAAACGTTGGCCGTGTCGGGGCTGGG 1372
Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955
||||| ||||| || | ||| ||| | || || || || ||||||||||| ||||||||
Sbjct 1371 GGTGGTCGGTCGCGACACGTACGGTGTGTTTCCGCTGCGCGGTAAGCTGCTGAACGTGCG 1312
Query 217956 CGATGC 217961
|| ||
Sbjct 1311 GGAAGC 1306
>seq1607
Length=7712
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559
|| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 475 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 534
Query 142560 GAGCCCCACATCGGGC 142575
||||||||| | ||||
Sbjct 535 GAGCCCCACGTTGGGC 550
>seq39139
Length=3583
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1993 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1934
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 1933 CCCCACGTTGGGC 1921
>seq38082
Length=16389
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 3342 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3401
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 3402 CCCCACGTTGGGC 3414
>seq23518
Length=2533
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 193 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 134
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 133 CCCCACGTTGGGC 121
>seq18011
Length=2861
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1360 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1301
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 1300 CCCCACGTTGGGC 1288
>seq37411
Length=7051
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 5489 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5430
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 5429 CCCACGTTGGGC 5418
>seq32789
Length=1911
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1911 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1852
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 1851 CCCACGTTGGGC 1840
>seq24173
Length=5087
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 2671 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2612
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 2611 CCCACGTTGGGC 2600
>seq22577
Length=8447
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 2321 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2380
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 2381 CCCACGTTGGGC 2392
>seq1824
Length=3090
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 895 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 954
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 955 CCCACGTTGGGC 966
>seq950
Length=7445
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 5559 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5500
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 5499 CCCACGTTGGGC 5488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027284683008925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |