Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq41190 176 8e-39 seq20716 109 1e-18 seq2403 95.1 2e-14 >seq41190 Length=4563 Score = 176 bits (194), Expect = 8e-39 Identities = 318/465 (68%), Gaps = 0/465 (0%) Strand=Plus/Minus Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317 ||||||||||||||| ||||| || |||||||| || ||||| | || | || || Sbjct 1148 CCACATTGCTTCGACGTAGTCTTTTGCGTGGCCCCAGTCACGCTTCGAATCGAGATTACC 1089 Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCG 268377 ||| | ||| | ||||| ||||||| | || | |||||||||||| || Sbjct 1088 GAGCTCGACGCACTCCTGCTGGCCGAGCGAAATCTTCGCCACCGAGCGAGTGATTTTGCG 1029 Query 268378 GGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGC 268437 ||||| || |||| || || | || ||||||||||||||| || |||||||| || Sbjct 1028 TGTCACAAAGTTCTCACCCCGCCGGGGCGACTCGTGGTTGAAGAGAATACCGTTGCAGGC 969 Query 268438 GAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAAC 268497 |||||| || ||||| ||||| || | || ||||||| | |||| |||||| Sbjct 968 AAACATGTTGTACGCCTCGCGGTAATTGATCACTATCCAGTAGCCGTACATTTTTGCACA 909 Query 268498 TGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTT 268557 |||||||| || || |||| ||| || || | || || || |||| || || Sbjct 908 AGCGTACGGCGAGCGCGGATAGAATGGAGTTTTTTCGTTCTGCGGCGTTTCGACCACCTT 849 Query 268558 GCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGAT 268617 ||| |||| ||||| || || || || ||||| | | || || | || | | Sbjct 848 ACCATAGAGTTCGGACGTGGACGCCTGATAGAAGCGTACCGACTTCTCCTGTCCCACGGT 789 Query 268618 TCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGG 268677 ||||| || || |||| || || || || | ||||||| ||||| ||||| || Sbjct 788 ACGGATGGCATCAAGCAGCCGCAGTGTACCGACCGCATCCACTTCCGCCGTATATTCGCT 729 Query 268678 CATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATA 268722 || ||||| || | || ||||||||| || ||| | ||||| || Sbjct 728 CAGGTCGAACGAGATCTTGACATGGCTTTGCGCGGCAAGGTTGTA 684 >seq20716 Length=12815 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||| || | |||||| |||||||| || || | || || || || || || || ||| Sbjct 2 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATACCCTCC 61 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| ||||| || |||||| || || | | || || || | ||| Sbjct 62 TTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTA 121 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || ||||||||||| |||||||| |||||||| Sbjct 122 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 159 >seq2403 Length=4580 Score = 95.1 bits (104), Expect = 2e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 195991 TTGGGTCGTCTTTGACGAAATCCACTACATGTCCGACGATGCGCGTGGTACCGTGTGGGA 196050 |||||| |||| ||||| || ||||||||| |||| | | ||||||| |||||||| Sbjct 1317 TTGGGTGATCTTCGACGAGATTCACTACATGCGCGACAAGGAGCGTGGTGTGGTGTGGGA 1376 Query 196051 AGAAAGCCTTATCCTCATCCCGGATACCATCCGCTGTGTCTTTTTGTCCGCGACTGTTCC 196110 ||||| ||||||||| | ||||| | | | | || || || |||||||||| | || Sbjct 1377 AGAAACGCTTATCCTCCTGCCGGACAACGTGCACTACGTGTTCCTGTCCGCGACGATCCC 1436 Query 196111 CAACGCCCGTGACTTTGCCTTGTGG 196135 ||||| || | |||||| |||| Sbjct 1437 GAACGCACGGCAGTTTGCCGAGTGG 1461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921139412261000