Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20koliensis_20[genbank_20GCA_5F000956275.1_202015-03-19] 41,925 sequences; 151,110,088 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq18559 111 4e-21 >seq18559 Length=7648 Score = 111 bits (122), Expect = 4e-21 Identities = 213/310 (69%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 3198 CTGCGAGCTGCTAAACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCTTTAT 3257 ||| |||||||||||||| |||||||| ||| |||||| | ||||||| | || | Sbjct 2224 CTGTGAGCTGCTAAACTTCGTCAACGTGCTCGGACAGATCTACTTCATGGACTTTTTCCT 2165 Query 3258 AGGCGAAGACTTTTTGTTGTACGGAATCTATGTTACCTTCTTCAACCAGGAAGCCGCCCA 3317 | || ||| || |||||| | | |||| ||||| | || | | |||| Sbjct 2164 GGACGGAGAGTTCACCACGTACGGTAGCGATGTGGTGCGCTTCACCGAG-ATGGAGCCCG 2106 Query 3318 TCCGAACATGACGAACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCA 3377 || | || ||| || ||| ||| || ||||| | | | || |||||| || || Sbjct 2105 AG-GAGCGTGGCGATCCG-ATGGCGCGCGTGTTTCCGAAAGTGACCAAATGTACCTTCCA 2048 Query 3378 CAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAA 3437 ||| |||||||| || || || | || | ||| || || ||| | | ||| ||| Sbjct 2047 CAAGTACGGTCCGTCCGGTAGTGTGCAGAAGTTCGACGGTCTGTGCGTGTTGCCGTTGAA 1988 Query 3438 CGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCCATCAT 3497 | | |||||||||||||||||| | ||||| |||||||||||| |||| ||||| | Sbjct 1987 CATTGTCAACGAGAAGATCTACGTGTTCCTGTGGTTCTGGTTCATTCTGCTGACCATCCT 1928 Query 3498 CAGCGGTATC 3507 || ||| ||| Sbjct 1927 CACCGGCATC 1918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12474277237500